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The map label for this gene is motB

Identifier: 37679056

GI number: 37679056

Start: 876085

End: 877041

Strand: Direct

Name: motB

Synonym: VV0872

Alternate gene names: 37679056

Gene position: 876085-877041 (Clockwise)

Preceding gene: 37679055

Following gene: 37679057

Centisome position: 26.12

GC content: 50.57

Gene sequence:

>957_bases
GTGATGGATGACGATAGCAAATGTGATTGTCCCCCTCCCGGATTACCTCTGTGGATGGGTACCTTCGCTGACTTGATGTC
ACTGTTGATGTGTTTCTTCGTACTGCTGCTTTCGTTTTCGGAAATGGATGTATTGAAGTTCAAACAGATCGCGGGCTCAA
TGAAATTTGCCTTTGGTGTGCAAAATCGCCTTGAGGTGAAAGACATTCCCAAAGGCACCAGTATCATCGCTCAAGAATTT
CGTCCGGGGCGTCCAGAGCCGACACCGATTGACGTGATCATGCAGCAAACCATTGATATCACCCAGCAAACCTTAGAGTT
TCATGAGGGAGAGTCGGATCGCGCGGGTGGTACCCAGCGTGACCAAGGCAAAATGACGGGCGGGCAGTCGCCTGAAACCT
CGACCCAGACCAACCAAAATACCGAACAACAACAGCAACAGCAGCAATCGGAAGCCATGTCGAAAGAGATGGAAACGCTG
ATGGAAAGCATCAAGAAGGCCCTTGAGCGTGAAATAGAGCAAGGGGCGATTGAAGTGGAAAACCTAGGCCAGCAAATTGT
GATTCGCATGCGAGAGAAGGGCGCCTTCCCAGAAGGCTCTGCGTTCTTGCAGCCGAAATTCCGCCCGCTAGTGCGACAAA
TTGCTGAGTTGGTAAAAGATGTCCCTGGCATTGTGCGCATTTCAGGCCACACGGACAATCAGCGTCTTGATTCGGAGCTT
TATCGTTCTAACTGGGATCTCTCTGCGCAACGTGCTGTTTCGGTGGCGCAAGAGATGGAAAAAGTGCGCGGATTTTCTCA
TCAGCGCCTACGGGTGCGAGGCATGGCTGATACCGATCCTCTGGTCGATAACGATACTGAAGAAAACCGTGCAAGAAACC
GCCGAGTGGAAATCAGCATTATGCAAGGTGAGCCTTTGTATAGTGATGAAATTCCAGCCATTCCTCAAGACCAGTAA

Upstream 100 bases:

>100_bases
CCAAGATGGCCAGAACCCACGTGTTATCGACAGCTACTTGAAAAACTACCTCAACGAGAGCAAGCGTGCCCTCGATATCA
ACGATTAATCACGGGAGTAT

Downstream 100 bases:

>100_bases
TTGGGTACGTGAGTTGAATAAAAGACGAGCAGAAATGCTCGTCTTTTTTATGGTTATAATTCGTGTATAATCTTGCGCCC
TAAGTCCCACACCTTAGTGC

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MMDDDSKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEF
RPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETL
MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDNQRLDSEL
YRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARNRRVEISIMQGEPLYSDEIPAIPQDQ

Sequences:

>Translated_318_residues
MMDDDSKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEF
RPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETL
MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDNQRLDSEL
YRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARNRRVEISIMQGEPLYSDEIPAIPQDQ
>Mature_318_residues
MMDDDSKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEF
RPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQRDQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETL
MESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDNQRLDSEL
YRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARNRRVEISIMQGEPLYSDEIPAIPQDQ

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=293, Percent_Identity=26.962457337884, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI48994946, Length=126, Percent_Identity=31.7460317460317, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 35993; Mature: 35993

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDDDSKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
QNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKKALEREIEQGAIEVE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDNQRLDSEL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
YRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARNRRVEISI
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCHHHHHHCCEEEEEE
MQGEPLYSDEIPAIPQDQ
ECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMDDDSKCDCPPPGLPLWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
QNRLEVKDIPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFHEGESDRAGGTQR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DQGKMTGGQSPETSTQTNQNTEQQQQQQQSEAMSKEMETLMESIKKALEREIEQGAIEVE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDNQRLDSEL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH
YRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARNRRVEISI
HHCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCHHHHHHCCEEEEEE
MQGEPLYSDEIPAIPQDQ
ECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]