| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679035
Identifier: 37679035
GI number: 37679035
Start: 856119
End: 856658
Strand: Direct
Name: 37679035
Synonym: VV0851
Alternate gene names: NA
Gene position: 856119-856658 (Clockwise)
Preceding gene: 37679032
Following gene: 37679037
Centisome position: 25.52
GC content: 45.37
Gene sequence:
>540_bases ATGAAAAAGACGATCACTAAAGTCGTGGCATTATCTGTAGCAGCAATGGCATTGTCTGGCTGTGTAGGTAGCAATGCAGT AACGGGTTATGTTATGGGCTTCAACCTGAAAGCTGTAGACAACCGTTATGCTCGTGGTGGTCTAAACATGTTGTTGGCGC CAGTATACGGTGTGGCGATTGCAGCAGACTACATTGTGTTTAACTCACTGGAATTCTGGACGGGCAAAAACCCTCTAAAC GGCAAGCCACACATCTTTGACACTAAGATGGACACTTACATTGATGTGAACCACCAACTAGACAAGTCGCTAACAACTGC ACCGATTGCGCCGTTAACGAACAACCGTATCATTGAGCAAGGTATGATGCAGCAGATCGACGAAAATACCGTTCAAATGG ACATCACCTACAACAATGGTGAAAAAGCGACATTGACCGGTGTACGTGAAGGTGATTTCGTGACGTATTACATTGATGGT GAAGTGGTTGCACAAACTTCAATGGATGAGCTAGCGGCTTACGCGCAAAATCGTGCTTAA
Upstream 100 bases:
>100_bases TCGCTTTAGCAGCACAGAATTTTCCTACTTTGAGGATGGTTTTTATCTGCGCTAATATGCGCCCCCAATTCCTGTTCTCC AAATTACATTCGAGGTAAAT
Downstream 100 bases:
>100_bases TCGATAGTGAACGAGACAGAAAGGGCGCGAGTTTCGCGCCCTTTGTTTTTATCGTGTTACGCCTTTTCAGGAATCGCTTC CAGTAACGCCACCATTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKKTITKVVALSVAAMALSGCVGSNAVTGYVMGFNLKAVDNRYARGGLNMLLAPVYGVAIAADYIVFNSLEFWTGKNPLN GKPHIFDTKMDTYIDVNHQLDKSLTTAPIAPLTNNRIIEQGMMQQIDENTVQMDITYNNGEKATLTGVREGDFVTYYIDG EVVAQTSMDELAAYAQNRA
Sequences:
>Translated_179_residues MKKTITKVVALSVAAMALSGCVGSNAVTGYVMGFNLKAVDNRYARGGLNMLLAPVYGVAIAADYIVFNSLEFWTGKNPLN GKPHIFDTKMDTYIDVNHQLDKSLTTAPIAPLTNNRIIEQGMMQQIDENTVQMDITYNNGEKATLTGVREGDFVTYYIDG EVVAQTSMDELAAYAQNRA >Mature_179_residues MKKTITKVVALSVAAMALSGCVGSNAVTGYVMGFNLKAVDNRYARGGLNMLLAPVYGVAIAADYIVFNSLEFWTGKNPLN GKPHIFDTKMDTYIDVNHQLDKSLTTAPIAPLTNNRIIEQGMMQQIDENTVQMDITYNNGEKATLTGVREGDFVTYYIDG EVVAQTSMDELAAYAQNRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19542; Mature: 19542
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTITKVVALSVAAMALSGCVGSNAVTGYVMGFNLKAVDNRYARGGLNMLLAPVYGVAI CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHCCHHHHHHHHHHHHH AADYIVFNSLEFWTGKNPLNGKPHIFDTKMDTYIDVNHQLDKSLTTAPIAPLTNNRIIEQ HHHHHHCCCEEEECCCCCCCCCCEEEECCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHH GMMQQIDENTVQMDITYNNGEKATLTGVREGDFVTYYIDGEVVAQTSMDELAAYAQNRA HHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHCCC >Mature Secondary Structure MKKTITKVVALSVAAMALSGCVGSNAVTGYVMGFNLKAVDNRYARGGLNMLLAPVYGVAI CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHCCHHHHHHHHHHHHH AADYIVFNSLEFWTGKNPLNGKPHIFDTKMDTYIDVNHQLDKSLTTAPIAPLTNNRIIEQ HHHHHHCCCEEEECCCCCCCCCCEEEECCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHH GMMQQIDENTVQMDITYNNGEKATLTGVREGDFVTYYIDGEVVAQTSMDELAAYAQNRA HHHHHHCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA