Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679021

Identifier: 37679021

GI number: 37679021

Start: 840205

End: 841449

Strand: Direct

Name: 37679021

Synonym: VV0837

Alternate gene names: NA

Gene position: 840205-841449 (Clockwise)

Preceding gene: 37679020

Following gene: 37679022

Centisome position: 25.05

GC content: 37.67

Gene sequence:

>1245_bases
ATGAAATTAAAAGCTGGCTATGTGACATTGTTATTTACTGCACTCTTGTTGTTGTTTTCCTTGGTTATTTCCTTAGCCTC
TGCCAGAGGATTACTTTATCAGATAAAAATCGCTCAAAATGAAGTCAAGTCAAGGCAAGAGCACTGGTTGGCAGAAGGTG
GATTGGAGTGTGTTTACACAAAAACAGTCCAGGATGGTGTTATTCCTACACTATCCTCGATACCCGAATGCAACATAGGG
AGTCATTCAGTGACTTTTACCTATGAAGCTGTCACCGCAGTGAACAACCCAACGAAGGTTACCAGCAAAATTGGTTATGC
AGGTTTAAGTAAAAATATTGTAAGTTCATCGACAGCTTCGAGTTCAGGCGCTTTAAAGTCTTCAGCAAATCTATTTTTTA
ATGCTTCTATGTCTTTTTATACCCCAGATCCTGGATTAGAGACTCCAGATGGTTTTGAGTGTGCAATTATTCGCCATAAA
GGCAATATCACACTTAGAGCGGCAATGGATAATAAAGGGTTGCAGGATGGGAGACCTCCTTCAAGTGATTTTAGTAGCTC
TAAAAACTGTCTTATGACTCATCGTTCTCATTGGGGCAACAAAGATATCGTGAAAGATACGAATCTAAAACCATTTGAAG
AGTTTTTCGGAGTTACAGAGGACAAACATAATCAAGTTAGAAGCAAGTTCGACTACCAAATTTCTGGTGGAGGAGCTGAT
TGTGGTGCACGAATAAAAGATAAACTTTTGGCTCATAAAGGAGCTAACCCTGGCTCTAAAGTTTCAATTTGGGTGGATGG
TAGTTGCGAGCTGGCCGATCCCTATATTTTAGAAATTGCTCAAGAGTCACAAAAAACAGACGGATTATTATTACTTGTTC
ATGAAGGTGTATTTTCAATTAATAGTCCTTGGAAAGAGGATAAACCGACCCCAGATATAAAAGGTTTGGTTTTTCATTTT
AATGATGAATTTATAGCATCCGAGAATGATTGGAATAATATGGCTAACAAGCCAAACTTATTTCATTCGGTACATAATTT
CGATTTATCTGAGCGTAAGAAAACTAGTTTCTATCATCATGGGTCTATTTCTTTTACCGGTGGATTTTACATAGATGATG
ATAGAAATAATGCAATGTTTAACAACAGTATGGGATTTCACTTCAATAATGATGTTATGAGCAACCTGCAGAGCGCATTT
GTATCTAAACTAAAATGGCAAGAGGGTAGCTGGAATGCAAATTAA

Upstream 100 bases:

>100_bases
AAACATCAAGTAGGATGACCACAATAGTTCTTGGATTAAGTGCTAATGATGGATCATTGAGTGATACTTCAACCGTTATA
ATCAAACAAAGGAACTGGCA

Downstream 100 bases:

>100_bases
TCAACGTGGTTTTAGTTTGTTGGAAGTAATGATTTCATTTGTACTGGTTGGCTTTGGTGCGCTGGGGTTAGTTAAGCTAC
AGGCTTACATCGAGCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKLKAGYVTLLFTALLLLFSLVISLASARGLLYQIKIAQNEVKSRQEHWLAEGGLECVYTKTVQDGVIPTLSSIPECNIG
SHSVTFTYEAVTAVNNPTKVTSKIGYAGLSKNIVSSSTASSSGALKSSANLFFNASMSFYTPDPGLETPDGFECAIIRHK
GNITLRAAMDNKGLQDGRPPSSDFSSSKNCLMTHRSHWGNKDIVKDTNLKPFEEFFGVTEDKHNQVRSKFDYQISGGGAD
CGARIKDKLLAHKGANPGSKVSIWVDGSCELADPYILEIAQESQKTDGLLLLVHEGVFSINSPWKEDKPTPDIKGLVFHF
NDEFIASENDWNNMANKPNLFHSVHNFDLSERKKTSFYHHGSISFTGGFYIDDDRNNAMFNNSMGFHFNNDVMSNLQSAF
VSKLKWQEGSWNAN

Sequences:

>Translated_414_residues
MKLKAGYVTLLFTALLLLFSLVISLASARGLLYQIKIAQNEVKSRQEHWLAEGGLECVYTKTVQDGVIPTLSSIPECNIG
SHSVTFTYEAVTAVNNPTKVTSKIGYAGLSKNIVSSSTASSSGALKSSANLFFNASMSFYTPDPGLETPDGFECAIIRHK
GNITLRAAMDNKGLQDGRPPSSDFSSSKNCLMTHRSHWGNKDIVKDTNLKPFEEFFGVTEDKHNQVRSKFDYQISGGGAD
CGARIKDKLLAHKGANPGSKVSIWVDGSCELADPYILEIAQESQKTDGLLLLVHEGVFSINSPWKEDKPTPDIKGLVFHF
NDEFIASENDWNNMANKPNLFHSVHNFDLSERKKTSFYHHGSISFTGGFYIDDDRNNAMFNNSMGFHFNNDVMSNLQSAF
VSKLKWQEGSWNAN
>Mature_414_residues
MKLKAGYVTLLFTALLLLFSLVISLASARGLLYQIKIAQNEVKSRQEHWLAEGGLECVYTKTVQDGVIPTLSSIPECNIG
SHSVTFTYEAVTAVNNPTKVTSKIGYAGLSKNIVSSSTASSSGALKSSANLFFNASMSFYTPDPGLETPDGFECAIIRHK
GNITLRAAMDNKGLQDGRPPSSDFSSSKNCLMTHRSHWGNKDIVKDTNLKPFEEFFGVTEDKHNQVRSKFDYQISGGGAD
CGARIKDKLLAHKGANPGSKVSIWVDGSCELADPYILEIAQESQKTDGLLLLVHEGVFSINSPWKEDKPTPDIKGLVFHF
NDEFIASENDWNNMANKPNLFHSVHNFDLSERKKTSFYHHGSISFTGGFYIDDDRNNAMFNNSMGFHFNNDVMSNLQSAF
VSKLKWQEGSWNAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45737; Mature: 45737

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKAGYVTLLFTALLLLFSLVISLASARGLLYQIKIAQNEVKSRQEHWLAEGGLECVYT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEE
KTVQDGVIPTLSSIPECNIGSHSVTFTYEAVTAVNNPTKVTSKIGYAGLSKNIVSSSTAS
ECCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCHHHCCCCCC
SSGALKSSANLFFNASMSFYTPDPGLETPDGFECAIIRHKGNITLRAAMDNKGLQDGRPP
CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC
SSDFSSSKNCLMTHRSHWGNKDIVKDTNLKPFEEFFGVTEDKHNQVRSKFDYQISGGGAD
CCCCCCCCCEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCEEECCCCCC
CGARIKDKLLAHKGANPGSKVSIWVDGSCELADPYILEIAQESQKTDGLLLLVHEGVFSI
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEC
NSPWKEDKPTPDIKGLVFHFNDEFIASENDWNNMANKPNLFHSVHNFDLSERKKTSFYHH
CCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHCCCCCHHHCCCEEEC
GSISFTGGFYIDDDRNNAMFNNSMGFHFNNDVMSNLQSAFVSKLKWQEGSWNAN
CCEEEECCEEEECCCCCCEEECCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLKAGYVTLLFTALLLLFSLVISLASARGLLYQIKIAQNEVKSRQEHWLAEGGLECVYT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEE
KTVQDGVIPTLSSIPECNIGSHSVTFTYEAVTAVNNPTKVTSKIGYAGLSKNIVSSSTAS
ECCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCCCCHHHCCCCCC
SSGALKSSANLFFNASMSFYTPDPGLETPDGFECAIIRHKGNITLRAAMDNKGLQDGRPP
CCCCCCCCCCEEEECCEEEECCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC
SSDFSSSKNCLMTHRSHWGNKDIVKDTNLKPFEEFFGVTEDKHNQVRSKFDYQISGGGAD
CCCCCCCCCEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCEEECCCCCC
CGARIKDKLLAHKGANPGSKVSIWVDGSCELADPYILEIAQESQKTDGLLLLVHEGVFSI
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEC
NSPWKEDKPTPDIKGLVFHFNDEFIASENDWNNMANKPNLFHSVHNFDLSERKKTSFYHH
CCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHCCCCCHHHCCCEEEC
GSISFTGGFYIDDDRNNAMFNNSMGFHFNNDVMSNLQSAFVSKLKWQEGSWNAN
CCEEEECCEEEECCCCCCEEECCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA