| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is guaB [H]
Identifier: 37678959
GI number: 37678959
Start: 780530
End: 781999
Strand: Direct
Name: guaB [H]
Synonym: VV0775
Alternate gene names: 37678959
Gene position: 780530-781999 (Clockwise)
Preceding gene: 37678957
Following gene: 37678960
Centisome position: 23.27
GC content: 49.8
Gene sequence:
>1470_bases TTGCAAATGCTAAGAATTGCCAAAGAAGCGCTGACATTCGATGACGTACTACTCGTGCCAGCTCACTCCACTGTTCTCCC AAACACAGCTGATCTTCGCACTCAGTTGACCAAAAACATCACACTGAACATTCCTATGATCTCTGCCTCGATGGATACCG TGACGGAAGCTCGTCTCGCTATTGCACTTGCGCAGGAAGGTGGCATTGGCTTTATTCACAAGAATATGTCTATTGAACAG CAAGCTGCTGAAGTTCGTAAAGTGAAGAAGTTTGAAGCGGGTGTGGTAACGGATCCTGTCACTGTAAGCCCTGATGCGAC CATCGCGGATGTGGTTGCGCTGACCGACAAGCACGGTTTTGCTGGTTTCCCAGTGGTTACTGAAAGCAATGAGCTAGTGG GTATCATCACCGGTCGTGACGTACGTTTTGTGACAGACCTGTCTAAGAAAGTCTCTTCTGTCATGACACCAAAAGAAAAC TTGGCTGCCGTAAAAGAAGGTGCAACTCGCGCTGAAGTGCAAGAAAAAATGCATGAAGCCCGCGTTGAGAAAGTACTGGT TGTGAATGATGATTTCCAATTGACCGGCATGATCACGGCAAAAGACTTCCACAAAGCAGAACGTAAACCAAACGCATGTA AAGATGCGCAAGGTCGTCTACGCGTAGGCGCAGCGGTTGGTGCGGGCGCGGGTAACGAAGAACGCGTTGCTGCACTGGTT GAAGCCGGTGTTGATGTACTGTTGATTGACTCTTCACATGGTCACTCAGAAGGTGTTCTACAACGCATTCGTGATACACG AGCAGCATTCCCTAATCTTGATATCATTGGCGGCAACGTTGCGACAGCGGCGGGTGCAAAAGCCCTGATTGAAGCGGGTG TTAGCGCAGTAAAAGTGGGTATTGGCCCAGGCTCTATCTGTACGACTCGTATCGTTACTGGCGTAGGTGTTCCACAAATC ACCGCGATTGCAGACGCAGCGGAAGTAGCGAACCAATATGGCGTGCCAGTGATTGCTGATGGCGGTATCCGTTTCTCTGG TGATATCTGTAAAGCGATTGCGGCGGGCGCATCTTGTGTGATGGTTGGTTCTATGTTTGCGGGTACTGAAGAAGCACCGG GTGAAGTGATTCTTTACAACGGCCGTTCTTACAAAGCTTACCGTGGTATGGGTTCTTTGGGCGCAATGTCTCAAGGTTCT TCAGATCGTTACTTCCAGTCAGACAACGCAGCAGACAAGCTGGTACCAGAAGGTATCGAAGGCCGTATCGCGTACAAAGG CCGCCTAAAAGAGATCGTTCACCAGCAAATGGGTGGTCTACGTTCAAGCATGGGCCTAACAGGCAGTGCAACGATCGAAG AAATGCGCACTAAAGCTGAATTCGTACGCATTACGGGCGCGGGCATGCAAGAGTCTCACGTGCACGATGTACAAATCACC AAAGAAGCACCTAACTATCGCTTGGGTTAA
Upstream 100 bases:
>100_bases TATCTAATCCAAATGTAGCAAGTTGCTTAAAGCCTGCTGCCCTCATTATGCGAAACGATGAGATTGGATTGTTCTTTTTA CCTCTACATATTGTGAGATA
Downstream 100 bases:
>100_bases TTGACCCTGAGTTGAAATTTAAAGCTTATGGGGAGCGAGATGGGCTCCCCATCCACCAAATTTGATATCGAGATTAACCT CAATGACTAAAAATATTCAT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MQMLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQ QAAEVRKVKKFEAGVVTDPVTVSPDATIADVVALTDKHGFAGFPVVTESNELVGIITGRDVRFVTDLSKKVSSVMTPKEN LAAVKEGATRAEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKAERKPNACKDAQGRLRVGAAVGAGAGNEERVAALV EAGVDVLLIDSSHGHSEGVLQRIRDTRAAFPNLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQI TAIADAAEVANQYGVPVIADGGIRFSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILYNGRSYKAYRGMGSLGAMSQGS SDRYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEEMRTKAEFVRITGAGMQESHVHDVQIT KEAPNYRLG
Sequences:
>Translated_489_residues MQMLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQ QAAEVRKVKKFEAGVVTDPVTVSPDATIADVVALTDKHGFAGFPVVTESNELVGIITGRDVRFVTDLSKKVSSVMTPKEN LAAVKEGATRAEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKAERKPNACKDAQGRLRVGAAVGAGAGNEERVAALV EAGVDVLLIDSSHGHSEGVLQRIRDTRAAFPNLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQI TAIADAAEVANQYGVPVIADGGIRFSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILYNGRSYKAYRGMGSLGAMSQGS SDRYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEEMRTKAEFVRITGAGMQESHVHDVQIT KEAPNYRLG >Mature_489_residues MQMLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQ QAAEVRKVKKFEAGVVTDPVTVSPDATIADVVALTDKHGFAGFPVVTESNELVGIITGRDVRFVTDLSKKVSSVMTPKEN LAAVKEGATRAEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKAERKPNACKDAQGRLRVGAAVGAGAGNEERVAALV EAGVDVLLIDSSHGHSEGVLQRIRDTRAAFPNLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQI TAIADAAEVANQYGVPVIADGGIRFSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILYNGRSYKAYRGMGSLGAMSQGS SDRYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEEMRTKAEFVRITGAGMQESHVHDVQIT KEAPNYRLG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=487, Percent_Identity=42.5051334702259, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI156616279, Length=487, Percent_Identity=42.5051334702259, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI34328930, Length=487, Percent_Identity=42.5051334702259, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI34328928, Length=487, Percent_Identity=42.5051334702259, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI66933016, Length=490, Percent_Identity=41.8367346938776, Blast_Score=361, Evalue=1e-100, Organism=Homo sapiens, GI217035152, Length=488, Percent_Identity=42.2131147540984, Blast_Score=355, Evalue=7e-98, Organism=Homo sapiens, GI217035148, Length=487, Percent_Identity=41.4784394250513, Blast_Score=348, Evalue=6e-96, Organism=Homo sapiens, GI217035150, Length=487, Percent_Identity=39.0143737166324, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI156104880, Length=273, Percent_Identity=35.5311355311355, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=35.6275303643725, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=35.6275303643725, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=35.6275303643725, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=35.6275303643725, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=82.340862422998, Blast_Score=757, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=35.2941176470588, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71994385, Length=500, Percent_Identity=36.4, Blast_Score=290, Evalue=2e-78, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=39.8104265402844, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=36.1344537815126, Blast_Score=158, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=40.3726708074534, Blast_Score=348, Evalue=9e-97, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=39.7515527950311, Blast_Score=347, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=39.7515527950311, Blast_Score=339, Evalue=6e-94, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=41.4201183431953, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6319353, Length=101, Percent_Identity=41.5841584158416, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24641071, Length=482, Percent_Identity=40.6639004149378, Blast_Score=338, Evalue=5e-93, Organism=Drosophila melanogaster, GI24641073, Length=482, Percent_Identity=40.6639004149378, Blast_Score=338, Evalue=5e-93, Organism=Drosophila melanogaster, GI28571163, Length=440, Percent_Identity=41.1363636363636, Blast_Score=305, Evalue=6e-83,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51537; Mature: 51537
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMDTVTEARLA CCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEEEEEECCHHHHHHHHEE IALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVVTDPVTVSPDATIADVVALTDKHGF EEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHEEEECCCCC AGFPVVTESNELVGIITGRDVRFVTDLSKKVSSVMTPKENLAAVKEGATRAEVQEKMHEA CCCCEEECCCCEEEEEECCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH RVEKVLVVNDDFQLTGMITAKDFHKAERKPNACKDAQGRLRVGAAVGAGAGNEERVAALV HHCEEEEECCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH EAGVDVLLIDSSHGHSEGVLQRIRDTRAAFPNLDIIGGNVATAAGAKALIEAGVSAVKVG HCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEE IGPGSICTTRIVTGVGVPQITAIADAAEVANQYGVPVIADGGIRFSGDICKAIAAGASCV CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCCEE MVGSMFAGTEEAPGEVILYNGRSYKAYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIE EEHHHHCCCCCCCCCEEEECCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC GRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEEMRTKAEFVRITGAGMQESHVHDVQIT CEEEEHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEE KEAPNYRLG CCCCCCCCC >Mature Secondary Structure MQMLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMDTVTEARLA CCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEEEEEEECCHHHHHHHHEE IALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVVTDPVTVSPDATIADVVALTDKHGF EEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHEEEECCCCC AGFPVVTESNELVGIITGRDVRFVTDLSKKVSSVMTPKENLAAVKEGATRAEVQEKMHEA CCCCEEECCCCEEEEEECCCEEHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH RVEKVLVVNDDFQLTGMITAKDFHKAERKPNACKDAQGRLRVGAAVGAGAGNEERVAALV HHCEEEEECCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH EAGVDVLLIDSSHGHSEGVLQRIRDTRAAFPNLDIIGGNVATAAGAKALIEAGVSAVKVG HCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEE IGPGSICTTRIVTGVGVPQITAIADAAEVANQYGVPVIADGGIRFSGDICKAIAAGASCV CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCCEE MVGSMFAGTEEAPGEVILYNGRSYKAYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIE EEHHHHCCCCCCCCCEEEECCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC GRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEEMRTKAEFVRITGAGMQESHVHDVQIT CEEEEHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEE KEAPNYRLG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]