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The map label for this gene is secF

Identifier: 37678933

GI number: 37678933

Start: 756411

End: 757358

Strand: Direct

Name: secF

Synonym: VV0749

Alternate gene names: 37678933

Gene position: 756411-757358 (Clockwise)

Preceding gene: 37678932

Following gene: 37678934

Centisome position: 22.55

GC content: 47.36

Gene sequence:

>948_bases
ATGTTTCAAATTCTAAAAGCAGAGAAAACGATCGACTTTATGCGTTGGTCGAAGTTCGCATTTGTCTTCTCTTTGTTGAT
GATCGGTGCGTCGATTTTTACTCTCTCAACCAAATGGTTGAACTGGGGCCTGGACTTTACAGGCGGTACTCTGATTGAAG
TGGGCTTTGAGCAGCCTGCTAACCTTGAAGAGATCCGTAGTGCACTTGAAGCAAAAGGCTTTGGTGACGCAACGGTACAG
AACTTTGGTTCTGCTCGTGATGTCATGGTTCGCCTTCGCCCTCGTGAAGATATGGCAGGTGAAACCTTAGGGAACCAAAT
CCTAAGTGCGATCAAAGAAGGTACGGGTAAATCAGTCGAGATGCGCCGTATTGAGTTCGTTGGTCCAAATGTAGGTGATG
AGCTGACAGAAGCGGGTGGTCTGGCGATCTTGGTGTCGTTGATCTGTATTTTGATCTACGTCTCGATGCGTTTTGAATGG
CGTTTGGCGGCAGGTGCGGTAATGGCACTGGCGCATGACGTTATCATCACATTGGGTGTATTCTCTTTGATGCAAATTGA
AGTCGATCTTACCATTGTGGCGGCATTGCTGACGGTGGTGGGTTACTCACTCAACGATACCATTGTTGTCTTTGACCGTA
TTCGCGAAAACTTCCGCAAAATGCGTAAGGGTGAACCGGCTGAGATCATGAACAGCTCGATCACACAAACACTAAGCCGT
ACGTTGATTACCTCAGGTACGACCTTGTTTGTGGTGATTGCACTGTTTGTTCAAGGTGGGGCGATGATTCACGGTTTCGC
GACCGCATTGCTACTTGGTATTACCGTCGGTACTTACTCTTCTATCTATGTGGCATCTGCTTTGGCGCTCAAACTGGGTA
TCCAGAAAGAGCATTTAATGCCTCCGCAAGTCGAGAAAGAAGGTGCAGAATTCGAAGAGATGCCTTAA

Upstream 100 bases:

>100_bases
CCTCAATGTTTACGGCCATTATTGGTACACGTTGTATCGTGAACCTGCTTTATGGTGGTAAACGCATTAATAAACTGTCG
ATCTAAGGCTGGGAATTGTT

Downstream 100 bases:

>100_bases
TACTCTGCTCGAATCATCGATTGAAGCCACTGCAATTGCAGTGGCTTTTTTTGTTATAGACATATCACTTTCATCTAACG
TATATATTCGTCTAAAAAAC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MFQILKAEKTIDFMRWSKFAFVFSLLMIGASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEEIRSALEAKGFGDATVQ
NFGSARDVMVRLRPREDMAGETLGNQILSAIKEGTGKSVEMRRIEFVGPNVGDELTEAGGLAILVSLICILIYVSMRFEW
RLAAGAVMALAHDVIITLGVFSLMQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKGEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFVQGGAMIHGFATALLLGITVGTYSSIYVASALALKLGIQKEHLMPPQVEKEGAEFEEMP

Sequences:

>Translated_315_residues
MFQILKAEKTIDFMRWSKFAFVFSLLMIGASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEEIRSALEAKGFGDATVQ
NFGSARDVMVRLRPREDMAGETLGNQILSAIKEGTGKSVEMRRIEFVGPNVGDELTEAGGLAILVSLICILIYVSMRFEW
RLAAGAVMALAHDVIITLGVFSLMQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKGEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFVQGGAMIHGFATALLLGITVGTYSSIYVASALALKLGIQKEHLMPPQVEKEGAEFEEMP
>Mature_315_residues
MFQILKAEKTIDFMRWSKFAFVFSLLMIGASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEEIRSALEAKGFGDATVQ
NFGSARDVMVRLRPREDMAGETLGNQILSAIKEGTGKSVEMRRIEFVGPNVGDELTEAGGLAILVSLICILIYVSMRFEW
RLAAGAVMALAHDVIITLGVFSLMQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKGEPAEIMNSSITQTLSR
TLITSGTTLFVVIALFVQGGAMIHGFATALLLGITVGTYSSIYVASALALKLGIQKEHLMPPQVEKEGAEFEEMP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=309, Percent_Identity=55.9870550161812, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34514; Mature: 34514

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQILKAEKTIDFMRWSKFAFVFSLLMIGASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NLEEIRSALEAKGFGDATVQNFGSARDVMVRLRPREDMAGETLGNQILSAIKEGTGKSVE
CHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE
MRRIEFVGPNVGDELTEAGGLAILVSLICILIYVSMRFEWRLAAGAVMALAHDVIITLGV
EEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSLMQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKGEPAEIMNSSITQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLITSGTTLFVVIALFVQGGAMIHGFATALLLGITVGTYSSIYVASALALKLGIQKEHLM
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PPQVEKEGAEFEEMP
CCCHHHCCCCCCCCC
>Mature Secondary Structure
MFQILKAEKTIDFMRWSKFAFVFSLLMIGASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NLEEIRSALEAKGFGDATVQNFGSARDVMVRLRPREDMAGETLGNQILSAIKEGTGKSVE
CHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE
MRRIEFVGPNVGDELTEAGGLAILVSLICILIYVSMRFEWRLAAGAVMALAHDVIITLGV
EEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
FSLMQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKGEPAEIMNSSITQTLSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TLITSGTTLFVVIALFVQGGAMIHGFATALLLGITVGTYSSIYVASALALKLGIQKEHLM
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PPQVEKEGAEFEEMP
CCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]