| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is phoU [H]
Identifier: 37678915
GI number: 37678915
Start: 738351
End: 739049
Strand: Direct
Name: phoU [H]
Synonym: VV0731
Alternate gene names: 37678915
Gene position: 738351-739049 (Clockwise)
Preceding gene: 37678914
Following gene: 37678919
Centisome position: 22.01
GC content: 47.07
Gene sequence:
>699_bases ATGCATTTCGGGCGTCATATCTCAGGGCAATTCAATGTAGAACTTGAGTCTATTCGTACTCATGTCTTGACGATGGGGGG CTTGGTTGAACAACAGCTTTCTTTTGCCATGCAAGCGCTGCATAACGACGATATCGACCTTGCCAGACGAGTGGTGCGTG ATGATCACAAAGTCAATGCGATGGAAGTTTCCATTGATGATGCCTGCACGCGAATCATTGCCAAGCGTCAGCCAACCGCA AAAGATTTGCGCCTCATCATGGCGATCATCAAAACCATTACCGATTTAGAACGCATTGGTGATGTGGCAACTAAAATGGC CTATGTCGCCATCGAAAGCCCTTCATCCAAAGAGCGTCAGTTTAATGTTTCCTTAGAGCCACTGGCTCGACAAGCCATTC AGATGTTGCACTTGGTGTTAGACGCGTTTGCGCGGATGGACGTGGATGCGGCAGCTGAAGTGCACAAAATGGACGATAAA ATCGATGCGGAGTATGAGGCGGTGATTCGCCAGCTTATGACGTATATGATGGAAAATCCGAAGAATATCCCCAACATCCT TCAAGTAATGTGGTCTGCTCGTGCGATTGAACGAGTTGGTGATCGTTGCCAAAATATCTGCGAGTACATCATCTATTTCG TCAAGGGAAAAGATGTGCGCCATTTGGGTGATCAAGGGATCAATGACGCACTAAGATAA
Upstream 100 bases:
>100_bases TTCGGACGCAGATACCATCTTCACCTCTCCGATGAAAAAGCAAACTGAAGATTACATTACTGGCCGCTACGGCTAGCACA TATTTTAGATAAGGATCGTT
Downstream 100 bases:
>100_bases TCGTTAGAAACGTAAGCCAAAGCCGAGATTAAAGTTAGGCGAGGTATCGGATGGGATATATGTTGCATTGGTGTCAAACA CGTTGAAGTCAACACCGGCG
Product: transcriptional regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSFAMQALHNDDIDLARRVVRDDHKVNAMEVSIDDACTRIIAKRQPTA KDLRLIMAIIKTITDLERIGDVATKMAYVAIESPSSKERQFNVSLEPLARQAIQMLHLVLDAFARMDVDAAAEVHKMDDK IDAEYEAVIRQLMTYMMENPKNIPNILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQGINDALR
Sequences:
>Translated_232_residues MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSFAMQALHNDDIDLARRVVRDDHKVNAMEVSIDDACTRIIAKRQPTA KDLRLIMAIIKTITDLERIGDVATKMAYVAIESPSSKERQFNVSLEPLARQAIQMLHLVLDAFARMDVDAAAEVHKMDDK IDAEYEAVIRQLMTYMMENPKNIPNILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQGINDALR >Mature_232_residues MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSFAMQALHNDDIDLARRVVRDDHKVNAMEVSIDDACTRIIAKRQPTA KDLRLIMAIIKTITDLERIGDVATKMAYVAIESPSSKERQFNVSLEPLARQAIQMLHLVLDAFARMDVDAAAEVHKMDDK IDAEYEAVIRQLMTYMMENPKNIPNILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQGINDALR
Specific function: Probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=223, Percent_Identity=62.3318385650224, Blast_Score=301, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26448; Mature: 26448
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSFAMQALHNDDIDLARRVVRDDHKVNA CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC MEVSIDDACTRIIAKRQPTAKDLRLIMAIIKTITDLERIGDVATKMAYVAIESPSSKERQ EEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCE FNVSLEPLARQAIQMLHLVLDAFARMDVDAAAEVHKMDDKIDAEYEAVIRQLMTYMMENP ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC KNIPNILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQGINDALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHCC >Mature Secondary Structure MHFGRHISGQFNVELESIRTHVLTMGGLVEQQLSFAMQALHNDDIDLARRVVRDDHKVNA CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC MEVSIDDACTRIIAKRQPTAKDLRLIMAIIKTITDLERIGDVATKMAYVAIESPSSKERQ EEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCE FNVSLEPLARQAIQMLHLVLDAFARMDVDAAAEVHKMDDKIDAEYEAVIRQLMTYMMENP ECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC KNIPNILQVMWSARAIERVGDRCQNICEYIIYFVKGKDVRHLGDQGINDALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2993631; 3881386; 7686882; 9278503; 3034860; 3536855; 8226621 [H]