Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is nagZ [H]

Identifier: 37678884

GI number: 37678884

Start: 698115

End: 699101

Strand: Direct

Name: nagZ [H]

Synonym: VV0700

Alternate gene names: 37678884

Gene position: 698115-699101 (Clockwise)

Preceding gene: 37678883

Following gene: 229047216

Centisome position: 20.81

GC content: 50.35

Gene sequence:

>987_bases
ATGGGGCCACTTTGGGTTGATGTCGCAGGTTATGAACTGAATGCAGAAGACAAAGAAATTTTACAGCATCCATCCGTTGG
CGGATTGATCTTATTTACCCGCAACTATCACGATAGTGAACAGCTGTTGGCGCTCACTGCGGCCATTCGCCAAGTGGTCA
AGCGTCCTTTTCTGATTGGCGTCGACCAAGAGGGAGGGCGAGTTCAGCGTTTCCGTGATGGTTTTTCTCTGATTCCCGCC
GCGGCAGAATATGCCAAACAAGCCAATGGGGAAGCGATGGCACAAATGGGCGGTTGGCTGATGGCGGCCGAACTGATTGC
TCATGATATCGACCTGAGTTTTGCCCCCGTGTTAGACCAAGGCTTTGGATGTAAAGCGATTGGCAACCGAGCGTTTGGTG
AAGATACGCAGACTATTTTGCGCCATAGCAGTGCCTACATGCAGGGCATGAAAGCGGTGGGGATGGCAACAACGGGCAAA
CACTTCCCTGGTCATGGCGGCGTGGTGGCAGATTCGCATCTTGAAACCCCGTTTGACCAACGAAGCGATATTGTTGAGCA
GGATATGGCAATCTTCAAAACGCAAATAGACGCAGGCTTATTAGACGCCATGATGCCTGCGCATGTGATTTACCCGCATT
ACGATCCTCAACCAGCGAGTGGTTCAGAATATTGGTTAAAACAGGTATTACGCCAGCAATTGGGTTTCAAGGGCTTAATT
TTTTCTGATGATCTCACCATGGAAGGGGCTGCCGTGATGGGAGGCCCTGCAGATAGGGCTTTACAAGCATTGAATGCGGG
CTGTGACATGCTTTTGATGTGCAATAAACGCGATGCACAAGTGGCAGCCTTGGACGCACTGCCTATCGTCGAGGTTCCCT
TGGCATTATCCTTGTTGAAGAAACGCAGCTTCAGCCTTTCTGAACTGAAATTGGCGCCGCAATGGAAAGAAGCAAGAGAA
AACATGCTACGCATACTGGGCCACTAA

Upstream 100 bases:

>100_bases
TCAATTCCATTGTGTTTTCATCATGCAAACCATTGTAATGCAAATTCATTCGGAATAACCTCGATGAGTTTGAGATATTC
CGTCTATTTTGGAGAGAAAA

Downstream 100 bases:

>100_bases
AACTTAACAAAAGACGAACTTGAAAACCAAAGCGAGGCGCTTTGGTTTTTTTATAATGTGTAATTTATTTTTTACATTTG
ATGTTTTTTATTGTTTACGG

Product: beta-hexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MGPLWVDVAGYELNAEDKEILQHPSVGGLILFTRNYHDSEQLLALTAAIRQVVKRPFLIGVDQEGGRVQRFRDGFSLIPA
AAEYAKQANGEAMAQMGGWLMAAELIAHDIDLSFAPVLDQGFGCKAIGNRAFGEDTQTILRHSSAYMQGMKAVGMATTGK
HFPGHGGVVADSHLETPFDQRSDIVEQDMAIFKTQIDAGLLDAMMPAHVIYPHYDPQPASGSEYWLKQVLRQQLGFKGLI
FSDDLTMEGAAVMGGPADRALQALNAGCDMLLMCNKRDAQVAALDALPIVEVPLALSLLKKRSFSLSELKLAPQWKEARE
NMLRILGH

Sequences:

>Translated_328_residues
MGPLWVDVAGYELNAEDKEILQHPSVGGLILFTRNYHDSEQLLALTAAIRQVVKRPFLIGVDQEGGRVQRFRDGFSLIPA
AAEYAKQANGEAMAQMGGWLMAAELIAHDIDLSFAPVLDQGFGCKAIGNRAFGEDTQTILRHSSAYMQGMKAVGMATTGK
HFPGHGGVVADSHLETPFDQRSDIVEQDMAIFKTQIDAGLLDAMMPAHVIYPHYDPQPASGSEYWLKQVLRQQLGFKGLI
FSDDLTMEGAAVMGGPADRALQALNAGCDMLLMCNKRDAQVAALDALPIVEVPLALSLLKKRSFSLSELKLAPQWKEARE
NMLRILGH
>Mature_327_residues
GPLWVDVAGYELNAEDKEILQHPSVGGLILFTRNYHDSEQLLALTAAIRQVVKRPFLIGVDQEGGRVQRFRDGFSLIPAA
AEYAKQANGEAMAQMGGWLMAAELIAHDIDLSFAPVLDQGFGCKAIGNRAFGEDTQTILRHSSAYMQGMKAVGMATTGKH
FPGHGGVVADSHLETPFDQRSDIVEQDMAIFKTQIDAGLLDAMMPAHVIYPHYDPQPASGSEYWLKQVLRQQLGFKGLIF
SDDLTMEGAAVMGGPADRALQALNAGCDMLLMCNKRDAQVAALDALPIVEVPLALSLLKKRSFSLSELKLAPQWKEAREN
MLRILGH

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=321, Percent_Identity=55.4517133956386, Blast_Score=355, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 35816; Mature: 35684

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPLWVDVAGYELNAEDKEILQHPSVGGLILFTRNYHDSEQLLALTAAIRQVVKRPFLIG
CCCEEEEEECCEECCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE
VDQEGGRVQRFRDGFSLIPAAAEYAKQANGEAMAQMGGWLMAAELIAHDIDLSFAPVLDQ
ECCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
GFGCKAIGNRAFGEDTQTILRHSSAYMQGMKAVGMATTGKHFPGHGGVVADSHLETPFDQ
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHH
RSDIVEQDMAIFKTQIDAGLLDAMMPAHVIYPHYDPQPASGSEYWLKQVLRQQLGFKGLI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
FSDDLTMEGAAVMGGPADRALQALNAGCDMLLMCNKRDAQVAALDALPIVEVPLALSLLK
EECCCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
KRSFSLSELKLAPQWKEARENMLRILGH
HCCCCHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GPLWVDVAGYELNAEDKEILQHPSVGGLILFTRNYHDSEQLLALTAAIRQVVKRPFLIG
CCEEEEEECCEECCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEE
VDQEGGRVQRFRDGFSLIPAAAEYAKQANGEAMAQMGGWLMAAELIAHDIDLSFAPVLDQ
ECCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
GFGCKAIGNRAFGEDTQTILRHSSAYMQGMKAVGMATTGKHFPGHGGVVADSHLETPFDQ
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHH
RSDIVEQDMAIFKTQIDAGLLDAMMPAHVIYPHYDPQPASGSEYWLKQVLRQQLGFKGLI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
FSDDLTMEGAAVMGGPADRALQALNAGCDMLLMCNKRDAQVAALDALPIVEVPLALSLLK
EECCCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
KRSFSLSELKLAPQWKEARENMLRILGH
HCCCCHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA