Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678857

Identifier: 37678857

GI number: 37678857

Start: 670898

End: 671209

Strand: Direct

Name: 37678857

Synonym: VV0673

Alternate gene names: NA

Gene position: 670898-671209 (Clockwise)

Preceding gene: 37678855

Following gene: 37678859

Centisome position: 20.0

GC content: 40.06

Gene sequence:

>312_bases
ATGCAGAAACATCAATTGGATCTTTGGCTACACAGTAAACATCATGATCATTATGTGCCGCCTAAAATGTTCGTAATAGG
TTGCTCTGATGCCAATGAGTATCTGTTGGCCATAGAGTACAAACATCATCTTGAGCCTATTAAACAAGGGGAGGAATTGA
TGCATTTCTCGTCTTTGGATTTAGTGAAAGAAGAATTACTGAGATTGGGGGTGGAGAAAGCGTATCTTCGTTTACATAAC
GTCTACGAAGAAGTTGGTAGCGACCGATTGGCTTCTTACTATGATATTGAACTGCAACTCACTCCTCATTGA

Upstream 100 bases:

>100_bases
TTCATCAACTTAAGCGAGCTTCTCTCTTGCCCTACCATATTGATCATGGACTACACTTACAGCCTAATGGACAAATCGCG
AAATCGGATTGAGGTAGGCT

Downstream 100 bases:

>100_bases
GCAATGAGTTGAAGGCATTTTGCAAAATCTGAGCGGTAAACTGAGTTCGTAAATAAAATCCACGTGGCAGTGTTTTAATC
GGTTTTCCGTTGATGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQKHQLDLWLHSKHHDHYVPPKMFVIGCSDANEYLLAIEYKHHLEPIKQGEELMHFSSLDLVKEELLRLGVEKAYLRLHN
VYEEVGSDRLASYYDIELQLTPH

Sequences:

>Translated_103_residues
MQKHQLDLWLHSKHHDHYVPPKMFVIGCSDANEYLLAIEYKHHLEPIKQGEELMHFSSLDLVKEELLRLGVEKAYLRLHN
VYEEVGSDRLASYYDIELQLTPH
>Mature_103_residues
MQKHQLDLWLHSKHHDHYVPPKMFVIGCSDANEYLLAIEYKHHLEPIKQGEELMHFSSLDLVKEELLRLGVEKAYLRLHN
VYEEVGSDRLASYYDIELQLTPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12222; Mature: 12222

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHQLDLWLHSKHHDHYVPPKMFVIGCSDANEYLLAIEYKHHLEPIKQGEELMHFSSLD
CCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCHHHCHHHHHHHHHHH
LVKEELLRLGVEKAYLRLHNVYEEVGSDRLASYYDIELQLTPH
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQKHQLDLWLHSKHHDHYVPPKMFVIGCSDANEYLLAIEYKHHLEPIKQGEELMHFSSLD
CCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCHHHCHHHHHHHHHHH
LVKEELLRLGVEKAYLRLHNVYEEVGSDRLASYYDIELQLTPH
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA