| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678829
Identifier: 37678829
GI number: 37678829
Start: 641622
End: 642071
Strand: Direct
Name: 37678829
Synonym: VV0645
Alternate gene names: NA
Gene position: 641622-642071 (Clockwise)
Preceding gene: 37678828
Following gene: 37678831
Centisome position: 19.13
GC content: 44.44
Gene sequence:
>450_bases ATGAAAAAACCATTAATTGCACTGCTGCCACTATTGCTGTTGGTAGGATGCACCTCCGAGCCAAACGTGAGTTGGCAGCA AGATAATCGTATCACCATTGCTGATACTCGCATTGAACTGGCCAGTAACCTTTGGATCAACCAGATGCCGACGCTAGGTG AATCGCAACAAGATAACCTGCATGGCGCTTTGTATCTCTCGTCGGATCGCGATCTGCCAGCTAGCTTAACAGTGAGTGAG TTAACGATTAAGCAAGGCGATCAAGAGTGGAAAATTGATGGCGATTTGCTTGAATTGCGCACACACAGTGAGAATAAATG GGAAATTGCCTTTGTGTGGCAAGCGAATTTTGATCCAGAAAAGAATGTTGATTTGCTGGTGGAGCTCGATAATCACGGTA AACGTGAATGGTTAGTTGAGCGCAACATTACGATCGATAAAGTGTTTTAA
Upstream 100 bases:
>100_bases GCATGGTGGGAAAATATCGCGGACTGGGTAGAAGAAATCAAGAATGAGTATCAAAATGATATTCAGATATTGAAGAGTTG GTTAGAACAGAGGTGAAGAA
Downstream 100 bases:
>100_bases GCCAAACGGATAGGGCATGACAAAATAAAAAAGGTTGGTAAACACCAACCTTTTTTTGTTTATGCGGCGCGCTTACGCTT CTAAATCACCACAGAAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Polymerase III Beta Chain
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKKPLIALLPLLLLVGCTSEPNVSWQQDNRITIADTRIELASNLWINQMPTLGESQQDNLHGALYLSSDRDLPASLTVSE LTIKQGDQEWKIDGDLLELRTHSENKWEIAFVWQANFDPEKNVDLLVELDNHGKREWLVERNITIDKVF
Sequences:
>Translated_149_residues MKKPLIALLPLLLLVGCTSEPNVSWQQDNRITIADTRIELASNLWINQMPTLGESQQDNLHGALYLSSDRDLPASLTVSE LTIKQGDQEWKIDGDLLELRTHSENKWEIAFVWQANFDPEKNVDLLVELDNHGKREWLVERNITIDKVF >Mature_149_residues MKKPLIALLPLLLLVGCTSEPNVSWQQDNRITIADTRIELASNLWINQMPTLGESQQDNLHGALYLSSDRDLPASLTVSE LTIKQGDQEWKIDGDLLELRTHSENKWEIAFVWQANFDPEKNVDLLVELDNHGKREWLVERNITIDKVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17119; Mature: 17119
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPLIALLPLLLLVGCTSEPNVSWQQDNRITIADTRIELASNLWINQMPTLGESQQDNL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEHHCCCCCCCCCCCCCCCCCC HGALYLSSDRDLPASLTVSELTIKQGDQEWKIDGDLLELRTHSENKWEIAFVWQANFDPE EEEEEEECCCCCCCEEEEEEEEEECCCCEEEECCEEEEEEECCCCCEEEEEEEECCCCCC KNVDLLVELDNHGKREWLVERNITIDKVF CCEEEEEEECCCCCEEEEEECCEEEEECC >Mature Secondary Structure MKKPLIALLPLLLLVGCTSEPNVSWQQDNRITIADTRIELASNLWINQMPTLGESQQDNL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECEEEEHHCCCCCCCCCCCCCCCCCC HGALYLSSDRDLPASLTVSELTIKQGDQEWKIDGDLLELRTHSENKWEIAFVWQANFDPE EEEEEEECCCCCCCEEEEEEEEEECCCCEEEECCEEEEEEECCCCCEEEEEEEECCCCCC KNVDLLVELDNHGKREWLVERNITIDKVF CCEEEEEEECCCCCEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA