| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ftsZ [H]
Identifier: 37678802
GI number: 37678802
Start: 604275
End: 605489
Strand: Direct
Name: ftsZ [H]
Synonym: VV0618
Alternate gene names: 37678802
Gene position: 604275-605489 (Clockwise)
Preceding gene: 161486661
Following gene: 37678803
Centisome position: 18.01
GC content: 48.56
Gene sequence:
>1215_bases ATGTTTGAACCGATGATGGAAATGTCTGACGATGCTGTAATTAAAGTCGTTGGGGTTGGTGGCGGCGGCGGTAATGCTGT AGAACACATGGTGCGTGAATCCATCGAAGGCGTGGAATTCATCAGCGTCAATACGGATGCACAAGCACTTCGTAAGACAA GTGTGGGCAATGTGATCCAGATTGGTGGCAACATCACTAAAGGTCTGGGTGCAGGTGCAAACCCACAAGTTGGTCGTGAC GCAGCTCTTGAAGACAAAGAAAGAATTAAAGAATTGCTGATTGGTGCCGATATGGTGTTTATCGCAGCTGGCATGGGCGG TGGTACTGGTACTGGTGCTGCTCCCGTTATTGCAGAAGTTGCGAAAGAGCTAGGCATCCTGACGGTTGCAGTAGTAACCA AGCCGTTCAGTTTCGAAGGAAAGAAGCGCTTAGCATTTGCTGAGCAAGGTATCGATGAATTATCAAAGCATGTTGACTCA TTGATCACCATTCCAAACGAAAAGCTGCTGAAAGTGCTTGGTCGCGGCATCACTTTGTTGGAAGCCTTTGCTAGCGCGAA TGATGTACTAAAAAATGCAGTGCAAGGTATCGCCGAGCTAATTACTCGCCCTGGCATGATTAACGTGGACTTTGCGGACG TTCGTACAGTGATGTCTGAGATGGGTCACGCGATGATGGGTAGCGGTGTGGCAAAAGGCGAAGATCGTGCAGAAGAAGCG GCGGAAATGGCTATTTCTAGCCCACTTCTCGAAGATATCGACCTTGCAGGTGCTCGTGGCGTGCTGGTTAACATTACCGC TGGTCTAGATATGCGCCTAGATGAATTTGAAACGGTGGGTAATACTGTTAAAGCGTTTGCTTCGGATAACGCAACAGTCG TAATCGGTACTTCACTTGATCCAGACATGGCGGATGAAATTCGAGTGACGGTGGTTGCTACCGGCATCGGTAACGATAAG AAACCAGACATCACGTTAGTTTCAGGTGGTAAAGCTAAAGTCGCTCAACCAACTGCAGCACCACAACCTGTTGTGGCAGC GAAGGTGGAAGAGAAACCGGCACAAACTTTGCAGGAAAGACCTCAGGTTACTCCTCAGCCATCGACGCCTGTTTCTTCTT CTCCTGCATCAGGTAGCCAGAATACGGCACCTAAGCAGGAAAAAGAGAGCGGATATTTGGATATTCCGGCATTTTTACGT CGTCAGGCTGATTAA
Upstream 100 bases:
>100_bases AGCCTAAACGTTCGGCAGTCACTGGCTTGTTTGGCAAGCTGCGTAATTGGATACAAAAAGAGTTTTAACCTGAGAGTTGC AGGAAAAACGGAGATAACAC
Downstream 100 bases:
>100_bases TATTCAGGCACAAATTTGACACTGTTCAAAATTGTGGTAGCATTCACGGTCGGCGTCTTAGACGACCGTGATTTGTAGCA CTTCAAAGAGGCAATCAGAT
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQIGGNITKGLGAGANPQVGRD AALEDKERIKELLIGADMVFIAAGMGGGTGTGAAPVIAEVAKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDS LITIPNEKLLKVLGRGITLLEAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGVAKGEDRAEEA AEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMADEIRVTVVATGIGNDK KPDITLVSGGKAKVAQPTAAPQPVVAAKVEEKPAQTLQERPQVTPQPSTPVSSSPASGSQNTAPKQEKESGYLDIPAFLR RQAD
Sequences:
>Translated_404_residues MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQIGGNITKGLGAGANPQVGRD AALEDKERIKELLIGADMVFIAAGMGGGTGTGAAPVIAEVAKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDS LITIPNEKLLKVLGRGITLLEAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGVAKGEDRAEEA AEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMADEIRVTVVATGIGNDK KPDITLVSGGKAKVAQPTAAPQPVVAAKVEEKPAQTLQERPQVTPQPSTPVSSSPASGSQNTAPKQEKESGYLDIPAFLR RQAD >Mature_404_residues MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQIGGNITKGLGAGANPQVGRD AALEDKERIKELLIGADMVFIAAGMGGGTGTGAAPVIAEVAKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDS LITIPNEKLLKVLGRGITLLEAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGVAKGEDRAEEA AEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLDPDMADEIRVTVVATGIGNDK KPDITLVSGGKAKVAQPTAAPQPVVAAKVEEKPAQTLQERPQVTPQPSTPVSSSPASGSQNTAPKQEKESGYLDIPAFLR RQAD
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=404, Percent_Identity=74.7524752475248, Blast_Score=525, Evalue=1e-150,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 42022; Mature: 42022
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQ CCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEE IGGNITKGLGAGANPQVGRDAALEDKERIKELLIGADMVFIAAGMGGGTGTGAAPVIAEV ECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHH AKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDSLITIPNEKLLKVLGRGITLL HHHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH EAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGVAKGEDRAEEA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCHHHHCCCCCCCHHHHHHH AEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLD HHHHHHCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PDMADEIRVTVVATGIGNDKKPDITLVSGGKAKVAQPTAAPQPVVAAKVEEKPAQTLQER CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC PQVTPQPSTPVSSSPASGSQNTAPKQEKESGYLDIPAFLRRQAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEECHHHHHCCCC >Mature Secondary Structure MFEPMMEMSDDAVIKVVGVGGGGGNAVEHMVRESIEGVEFISVNTDAQALRKTSVGNVIQ CCCCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEE IGGNITKGLGAGANPQVGRDAALEDKERIKELLIGADMVFIAAGMGGGTGTGAAPVIAEV ECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHH AKELGILTVAVVTKPFSFEGKKRLAFAEQGIDELSKHVDSLITIPNEKLLKVLGRGITLL HHHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH EAFASANDVLKNAVQGIAELITRPGMINVDFADVRTVMSEMGHAMMGSGVAKGEDRAEEA HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCHHHHCCCCCCCHHHHHHH AEMAISSPLLEDIDLAGARGVLVNITAGLDMRLDEFETVGNTVKAFASDNATVVIGTSLD HHHHHHCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC PDMADEIRVTVVATGIGNDKKPDITLVSGGKAKVAQPTAAPQPVVAAKVEEKPAQTLQER CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC PQVTPQPSTPVSSSPASGSQNTAPKQEKESGYLDIPAFLRRQAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11443086 [H]