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The map label for this gene is ygiF [H]

Identifier: 37678761

GI number: 37678761

Start: 558397

End: 559914

Strand: Direct

Name: ygiF [H]

Synonym: VV0577

Alternate gene names: 37678761

Gene position: 558397-559914 (Clockwise)

Preceding gene: 37678760

Following gene: 37678763

Centisome position: 16.65

GC content: 47.96

Gene sequence:

>1518_bases
ATGGAAACCGAGATAGAACTGAAGTTTTTTGTTTCTCCTGAATTTTCAGAAACTTTGCGCGAGAAAATCGCCGAAACCAA
AGTACTTCAGCACAGTTGTCGCGATTTAGGAAACACCTATTTTGATACGCCAGACAACTGGCTTCGCCAACACGATACAG
GCTTACGGATACGCCGCTTTGATGATGTTTTCGTGCAAACCGTCAAGACGGCAGGACGCGTTGTTGCAGGCTTACATCAA
CGTCCTGAATACAACGCAGAACATACCTGCAATACGCCAAATCTTCATTTACATCCTGGTGATATTTGGCCACAAGGTAA
AGATATTGACACCTTGCAATCGGAATTGATGGCGCTGTTCTCTACGAACTTTACCCGCGAACAATGGCTGATTGGTATGC
CTGATGGTAGCCAAGTCGAAGTGGCGTTTGACCAAGGAATGGTGAGCGCAGAGGATAAGCAAGATCCCATCTGTGAGGTG
GAGTTAGAACTGAAATCAGGCCAAACCGAAGCCTTATTTACCCTTGCTCGCCATTTGTGTGAGTCTGGCGGTATGCGTTT
AGGCAATTTAAGTAAAGCGGCGAAAGGTTATCGCTTGGCTTTAGGTTACCAAGGCGACGAAGTGAAACCATTGAGCCTAG
TGGATACGGGCAAGATGGACAATGTGGAATATTGTTTGATCAACTCACTCGAGCATGCCCTTTCCCATTGGCACTATCAC
GAGCAAATTTATGTGGAACGCGAATCGGTGGAAGCGTTACATGAAATCAGCCACGCCATCAGCTTTATTCGCCAAACCTT
GACCATTTATGGCGGAGTTGTGCCACGACGCGCCAGTGCGATTCTGCGTCAAGAGCTTAAATGGCTAGAAGAAGAGCTAG
CGTGGTTGTCAGAGCACGCACATTTAACGGAACTTCTTGATGACAAAGGCAATGTGCTGCGGAAATTGGATGCGCGTAAG
TTCTTAGTGGCGGAGTTAACCCAGCAATTTGAAGAGTTGCCTGATCGAGAAGAGGTGTTGACCTTGCTCACCAGTGCGCG
TTATACCGGATTACTGCTCGATTTGAGCCGTTGGATTTTAACGCGTGGTTGGCAGCCATTCCTTGATGACAAAGCAAGAG
AAAAGATGGCCAGCGCGATCCGTGACTTTTCAGTTAAGCAACTTGATCGCACTTGGGCTGAGTTGATGGAAGCGTTTCCG
GCGGAAAGAAGTATGTCGGCACAAGAGTACATCGATCAACGCTATCGTTTGATGCGCAATCTCTATACTGGTGTGGGCTT
TGCCAGCTTGTATGATGCAGAAGAGCGTAATAGCTTTCGTATGCCTTGGGCCGATTTGATCCATGGTATTGATGATCTCT
TAATGCTGCGTCATTTACTCCCGCTGGTGGAGAAACTCGAAGGCGAAGAGAAAGAGCAACTGGAACGCTGGTTGGTTCGT
CAGGAGCGCTCGATGCTGCATGCGATGGATCAAACTCGCGCCATTGGTGTGGAAGCAGAGCCATACTGGCGTCATTAA

Upstream 100 bases:

>100_bases
CATTAAAACTGTTTTAGATCATCATTAGTGCGATATTTCTTTCTTGCCCCTCGAGAATTTAGGCAATATCCTGTCCCAGT
CTGCTTGAGAAGGTATAACT

Downstream 100 bases:

>100_bases
TGGTGAAGCGAGATAAGAATAGGGCGATGCGCCCTATTTTTTTTGCTCCTCTTCGAGCCGTTTCAGCCGCTCTAAAATTT
CATGCTGTTGCTCGAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
METEIELKFFVSPEFSETLREKIAETKVLQHSCRDLGNTYFDTPDNWLRQHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHTCNTPNLHLHPGDIWPQGKDIDTLQSELMALFSTNFTREQWLIGMPDGSQVEVAFDQGMVSAEDKQDPICEV
ELELKSGQTEALFTLARHLCESGGMRLGNLSKAAKGYRLALGYQGDEVKPLSLVDTGKMDNVEYCLINSLEHALSHWHYH
EQIYVERESVEALHEISHAISFIRQTLTIYGGVVPRRASAILRQELKWLEEELAWLSEHAHLTELLDDKGNVLRKLDARK
FLVAELTQQFEELPDREEVLTLLTSARYTGLLLDLSRWILTRGWQPFLDDKAREKMASAIRDFSVKQLDRTWAELMEAFP
AERSMSAQEYIDQRYRLMRNLYTGVGFASLYDAEERNSFRMPWADLIHGIDDLLMLRHLLPLVEKLEGEEKEQLERWLVR
QERSMLHAMDQTRAIGVEAEPYWRH

Sequences:

>Translated_505_residues
METEIELKFFVSPEFSETLREKIAETKVLQHSCRDLGNTYFDTPDNWLRQHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHTCNTPNLHLHPGDIWPQGKDIDTLQSELMALFSTNFTREQWLIGMPDGSQVEVAFDQGMVSAEDKQDPICEV
ELELKSGQTEALFTLARHLCESGGMRLGNLSKAAKGYRLALGYQGDEVKPLSLVDTGKMDNVEYCLINSLEHALSHWHYH
EQIYVERESVEALHEISHAISFIRQTLTIYGGVVPRRASAILRQELKWLEEELAWLSEHAHLTELLDDKGNVLRKLDARK
FLVAELTQQFEELPDREEVLTLLTSARYTGLLLDLSRWILTRGWQPFLDDKAREKMASAIRDFSVKQLDRTWAELMEAFP
AERSMSAQEYIDQRYRLMRNLYTGVGFASLYDAEERNSFRMPWADLIHGIDDLLMLRHLLPLVEKLEGEEKEQLERWLVR
QERSMLHAMDQTRAIGVEAEPYWRH
>Mature_505_residues
METEIELKFFVSPEFSETLREKIAETKVLQHSCRDLGNTYFDTPDNWLRQHDTGLRIRRFDDVFVQTVKTAGRVVAGLHQ
RPEYNAEHTCNTPNLHLHPGDIWPQGKDIDTLQSELMALFSTNFTREQWLIGMPDGSQVEVAFDQGMVSAEDKQDPICEV
ELELKSGQTEALFTLARHLCESGGMRLGNLSKAAKGYRLALGYQGDEVKPLSLVDTGKMDNVEYCLINSLEHALSHWHYH
EQIYVERESVEALHEISHAISFIRQTLTIYGGVVPRRASAILRQELKWLEEELAWLSEHAHLTELLDDKGNVLRKLDARK
FLVAELTQQFEELPDREEVLTLLTSARYTGLLLDLSRWILTRGWQPFLDDKAREKMASAIRDFSVKQLDRTWAELMEAFP
AERSMSAQEYIDQRYRLMRNLYTGVGFASLYDAEERNSFRMPWADLIHGIDDLLMLRHLLPLVEKLEGEEKEQLERWLVR
QERSMLHAMDQTRAIGVEAEPYWRH

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=450, Percent_Identity=37.7777777777778, Blast_Score=268, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58584; Mature: 58584

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEIELKFFVSPEFSETLREKIAETKVLQHSCRDLGNTYFDTPDNWLRQHDTGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHH
DDVFVQTVKTAGRVVAGLHQRPEYNAEHTCNTPNLHLHPGDIWPQGKDIDTLQSELMALF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
STNFTREQWLIGMPDGSQVEVAFDQGMVSAEDKQDPICEVELELKSGQTEALFTLARHLC
HCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
ESGGMRLGNLSKAAKGYRLALGYQGDEVKPLSLVDTGKMDNVEYCLINSLEHALSHWHYH
HHCCCEECCHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
EQIYVERESVEALHEISHAISFIRQTLTIYGGVVPRRASAILRQELKWLEEELAWLSEHA
HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLTELLDDKGNVLRKLDARKFLVAELTQQFEELPDREEVLTLLTSARYTGLLLDLSRWIL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRGWQPFLDDKAREKMASAIRDFSVKQLDRTWAELMEAFPAERSMSAQEYIDQRYRLMRN
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LYTGVGFASLYDAEERNSFRMPWADLIHGIDDLLMLRHLLPLVEKLEGEEKEQLERWLVR
HHHHCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QERSMLHAMDQTRAIGVEAEPYWRH
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
METEIELKFFVSPEFSETLREKIAETKVLQHSCRDLGNTYFDTPDNWLRQHDTGLRIRRF
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHH
DDVFVQTVKTAGRVVAGLHQRPEYNAEHTCNTPNLHLHPGDIWPQGKDIDTLQSELMALF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
STNFTREQWLIGMPDGSQVEVAFDQGMVSAEDKQDPICEVELELKSGQTEALFTLARHLC
HCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
ESGGMRLGNLSKAAKGYRLALGYQGDEVKPLSLVDTGKMDNVEYCLINSLEHALSHWHYH
HHCCCEECCHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
EQIYVERESVEALHEISHAISFIRQTLTIYGGVVPRRASAILRQELKWLEEELAWLSEHA
HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLTELLDDKGNVLRKLDARKFLVAELTQQFEELPDREEVLTLLTSARYTGLLLDLSRWIL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRGWQPFLDDKAREKMASAIRDFSVKQLDRTWAELMEAFPAERSMSAQEYIDQRYRLMRN
HCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LYTGVGFASLYDAEERNSFRMPWADLIHGIDDLLMLRHLLPLVEKLEGEEKEQLERWLVR
HHHHCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QERSMLHAMDQTRAIGVEAEPYWRH
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]