| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is exeA [H]
Identifier: 37678756
GI number: 37678756
Start: 553092
End: 555248
Strand: Direct
Name: exeA [H]
Synonym: VV0572
Alternate gene names: 37678756
Gene position: 553092-555248 (Clockwise)
Preceding gene: 37678754
Following gene: 37678760
Centisome position: 16.49
GC content: 50.67
Gene sequence:
>2157_bases ATGTATAAGGATTTTTTTGGTTTCTCTGAGCTGCCTTTCTCGATAGTGCCCAATTCCCGCTATCTCTATTTAAGTCAGCG CCATCGTGAAGCCATCACACATTTACAGGCTGGCCTCGGCGATGGTGGTGGTTTTGCCATGCTGACTGGGGAAGTGGGGA CGGGGAAAACCACAGTCGCAAAATCAATGTTGGCTAACCTTGACGGCCAAACCTGTGCCGCTTTGCTGCTCAACCCAACC TTTTCCAGTGTTGAACTGCTTGAAGCCATTTGTGATGAGTTTGGCTTGAGCTACGCGGCCAACGCTTCCCTTAAACAGCT CAACCAACGCATTTATCAGTTTTTGTTGGAAAATCATCAGCAAAATATCCAAACCTTATTGGTGATTGATGAAGCACAAC ATTTGGCGGCGGATGTATTGGAGCAGTTGCGTTTATTGACCAATCTGGAAACGGAAACACGCAAGCTGTTAAAAGTGTTG TTGGTGGGGCAACCTGAACTGCAACAATTACTGCAGACCACACAATTGCGGCAACTTGCTCAGCGCATTACAGGCCGTTA TCACCTATTGCCACTGAATCCTCAAGAAACCGCAGACTACATTGCGTTTCGTATTCATACCGCTGGGGGAAATCGTACCC TGTTTGATCACGCCAGCGCCAAAGTGATTGCTCAGTATAGTCATGGTATTCCCCGCCTGATTAACTTGATTTGCGATAAA GCGTTGCAATTGAGCTATCACCAAGGCGACAAAAAAATCACGAAAGCGACGGTCGAGCGAGCTTGCCAGAACGTGATGGC ATTTCAGGCTGAGATCTATCAGCAAACCTCAAACCGTTCGTCTTTCCCTTGGGGAAAAGTGTCTGTAGTGGCCGCTTGCG TTGCTGGAGTGTTGGCTATTGCCAGCTATTGGCCTTTGATCCCCACTGACAATGTTGTTCCCACAGTGCCTCCGGTTGAG CGAGACAAGCCAGCAACCGAGTTGCCAATACTGCCTTCAGTGCCAGACATCTTGGTGAATGATGAACAGTGGCTTGGTGA GTCAGCTGTCGCGCGGATGACCACTCGAGCGCAAGGATTAGAAGATCTTTACAAATTATGGGGATATCGAGCAACGCGCA TCGATACCTTGTGTGAACAGCCATCCACGTCGATTTTCCAGTGCCAAGTTCGGCAGCTTAATTGGCAAGAGTTGCAGCAA ACGCCACACCCTTTGTTGCTGACACTGCAGCATGAAGGGCAACGGGCTTACGTTGTCTTGCTGGAAGTCAACTCAGAGCG CGTCGTTCTGCTTACGGGCGAGCAACGTCTCACATTCACGGTTCCACAATTGATGTCGTTATGGCGGGGCGAAGTCACCG ATCTATGGCCAATGCCTCTGAGAGAGACATTGCGCCTAGGTATGCACGGCGAGGCTATTGCAGTTTTGGACCAATTGCTC GCCAAAGCACTCAATGATGAACCGTTAAAGACGACGCAGTTTAATGCTGAGCTGATGCAGCGAGTGGAATGGTTTCAACG TTGGCAAGCGATGACCGAGGATGGCATCGCCGGTCAGCGTACTTTGGCGCGTTTGCAGCACATGGTCTCATTGTCCGAGC CGTGGCGAGACTTCACCAAGGCTGAGAAGCAAGGCGAAGAGCAGGCGATGCGCTATCCTGAGTTTCCCTCGCTCGCACCG CTTCCCAGAACATACCCATTGGCGGAAACTGGCGACGCTATCAACGTGGCCGATCAAACAAGCCCCACTTTGGTCGCGAG CCCATCAATACCGAGTGAAGAAAAGAAAACAGCGGACGAGCGACTGTTTGAAAACCTCGACCTGTCAGGCTTATCGCCAG AACTGGCGCAAAAAGTCGAAAATGCCTTGCTGGTGGAGACGCAAACCGACCACTCACCGCAAACGGAGTCAACGGTTTCA AGGCTCGATCTGAGCGCGGAAAAATGGCATGGGCGCTTGCCGCCACTCAATTTGCAGACACACATGTATTCGAGCGATCC GAAACGTCGCTGGTTGAAGATTAATGGTGCGGAGTTCCATCAAGGTGAGTGGATCGATAACCAGATTCAACTGGTGGAGA TTTCAGCGCAGTCGGTGATTGTTGAGTTCCAAGGAGAGCAGATCGAAATTCCAGCGCTCTATGAATGGAAAGGCTAA
Upstream 100 bases:
>100_bases ACGCGTGTGACCTCGAATATTTGCTTATCTGACTGGACATTGTAGCAAGCAATGGTACTTTGCTCTCTATTCAATTGACG TATTTGCATTTGGTCTGTGT
Downstream 100 bases:
>100_bases AGAGGAACAACAAGGGTTCATCAGCCGAAGAGTGAGAAAGAAATCGGGCCGCGAATGCGGCCCGTTTTGATGTTTATGCC CAGCCTGAGTTTGACTTCTT
Product: putative general secretion pathway protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 718; Mature: 718
Protein sequence:
>718_residues MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVAKSMLANLDGQTCAALLLNPT FSSVELLEAICDEFGLSYAANASLKQLNQRIYQFLLENHQQNIQTLLVIDEAQHLAADVLEQLRLLTNLETETRKLLKVL LVGQPELQQLLQTTQLRQLAQRITGRYHLLPLNPQETADYIAFRIHTAGGNRTLFDHASAKVIAQYSHGIPRLINLICDK ALQLSYHQGDKKITKATVERACQNVMAFQAEIYQQTSNRSSFPWGKVSVVAACVAGVLAIASYWPLIPTDNVVPTVPPVE RDKPATELPILPSVPDILVNDEQWLGESAVARMTTRAQGLEDLYKLWGYRATRIDTLCEQPSTSIFQCQVRQLNWQELQQ TPHPLLLTLQHEGQRAYVVLLEVNSERVVLLTGEQRLTFTVPQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIAVLDQLL AKALNDEPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRDFTKAEKQGEEQAMRYPEFPSLAP LPRTYPLAETGDAINVADQTSPTLVASPSIPSEEKKTADERLFENLDLSGLSPELAQKVENALLVETQTDHSPQTESTVS RLDLSAEKWHGRLPPLNLQTHMYSSDPKRRWLKINGAEFHQGEWIDNQIQLVEISAQSVIVEFQGEQIEIPALYEWKG
Sequences:
>Translated_718_residues MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVAKSMLANLDGQTCAALLLNPT FSSVELLEAICDEFGLSYAANASLKQLNQRIYQFLLENHQQNIQTLLVIDEAQHLAADVLEQLRLLTNLETETRKLLKVL LVGQPELQQLLQTTQLRQLAQRITGRYHLLPLNPQETADYIAFRIHTAGGNRTLFDHASAKVIAQYSHGIPRLINLICDK ALQLSYHQGDKKITKATVERACQNVMAFQAEIYQQTSNRSSFPWGKVSVVAACVAGVLAIASYWPLIPTDNVVPTVPPVE RDKPATELPILPSVPDILVNDEQWLGESAVARMTTRAQGLEDLYKLWGYRATRIDTLCEQPSTSIFQCQVRQLNWQELQQ TPHPLLLTLQHEGQRAYVVLLEVNSERVVLLTGEQRLTFTVPQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIAVLDQLL AKALNDEPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRDFTKAEKQGEEQAMRYPEFPSLAP LPRTYPLAETGDAINVADQTSPTLVASPSIPSEEKKTADERLFENLDLSGLSPELAQKVENALLVETQTDHSPQTESTVS RLDLSAEKWHGRLPPLNLQTHMYSSDPKRRWLKINGAEFHQGEWIDNQIQLVEISAQSVIVEFQGEQIEIPALYEWKG >Mature_718_residues MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVAKSMLANLDGQTCAALLLNPT FSSVELLEAICDEFGLSYAANASLKQLNQRIYQFLLENHQQNIQTLLVIDEAQHLAADVLEQLRLLTNLETETRKLLKVL LVGQPELQQLLQTTQLRQLAQRITGRYHLLPLNPQETADYIAFRIHTAGGNRTLFDHASAKVIAQYSHGIPRLINLICDK ALQLSYHQGDKKITKATVERACQNVMAFQAEIYQQTSNRSSFPWGKVSVVAACVAGVLAIASYWPLIPTDNVVPTVPPVE RDKPATELPILPSVPDILVNDEQWLGESAVARMTTRAQGLEDLYKLWGYRATRIDTLCEQPSTSIFQCQVRQLNWQELQQ TPHPLLLTLQHEGQRAYVVLLEVNSERVVLLTGEQRLTFTVPQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIAVLDQLL AKALNDEPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRDFTKAEKQGEEQAMRYPEFPSLAP LPRTYPLAETGDAINVADQTSPTLVASPSIPSEEKKTADERLFENLDLSGLSPELAQKVENALLVETQTDHSPQTESTVS RLDLSAEKWHGRLPPLNLQTHMYSSDPKRRWLKINGAEFHQGEWIDNQIQLVEISAQSVIVEFQGEQIEIPALYEWKG
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
Organism=Escherichia coli, GI1789720, Length=240, Percent_Identity=25.4166666666667, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 80908; Mature: 80908
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVA CCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH KSMLANLDGQTCAALLLNPTFSSVELLEAICDEFGLSYAANASLKQLNQRIYQFLLENHQ HHHHHCCCCCCEEHEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QNIQTLLVIDEAQHLAADVLEQLRLLTNLETETRKLLKVLLVGQPELQQLLQTTQLRQLA CCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRITGRYHLLPLNPQETADYIAFRIHTAGGNRTLFDHASAKVIAQYSHGIPRLINLICDK HHHCCCEEEEECCCHHCCCEEEEEEEECCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHH ALQLSYHQGDKKITKATVERACQNVMAFQAEIYQQTSNRSSFPWGKVSVVAACVAGVLAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ASYWPLIPTDNVVPTVPPVERDKPATELPILPSVPDILVNDEQWLGESAVARMTTRAQGL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCHHHHHHHHHHHHHH EDLYKLWGYRATRIDTLCEQPSTSIFQCQVRQLNWQELQQTPHPLLLTLQHEGQRAYVVL HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCEEEEEEECCCEEEEEE LEVNSERVVLLTGEQRLTFTVPQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIAVLDQLL EEECCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH AKALNDEPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRDFTK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AEKQGEEQAMRYPEFPSLAPLPRTYPLAETGDAINVADQTSPTLVASPSIPSEEKKTADE HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHH RLFENLDLSGLSPELAQKVENALLVETQTDHSPQTESTVSRLDLSAEKWHGRLPPLNLQT HHHHCCCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCEE HMYSSDPKRRWLKINGAEFHQGEWIDNQIQLVEISAQSVIVEFQGEQIEIPALYEWKG CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCEEECCEEECCCC >Mature Secondary Structure MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVA CCCCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH KSMLANLDGQTCAALLLNPTFSSVELLEAICDEFGLSYAANASLKQLNQRIYQFLLENHQ HHHHHCCCCCCEEHEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QNIQTLLVIDEAQHLAADVLEQLRLLTNLETETRKLLKVLLVGQPELQQLLQTTQLRQLA CCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRITGRYHLLPLNPQETADYIAFRIHTAGGNRTLFDHASAKVIAQYSHGIPRLINLICDK HHHCCCEEEEECCCHHCCCEEEEEEEECCCCCEEECCCCHHHHHHHHCCHHHHHHHHHHH ALQLSYHQGDKKITKATVERACQNVMAFQAEIYQQTSNRSSFPWGKVSVVAACVAGVLAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ASYWPLIPTDNVVPTVPPVERDKPATELPILPSVPDILVNDEQWLGESAVARMTTRAQGL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCHHHHHHHHHHHHHH EDLYKLWGYRATRIDTLCEQPSTSIFQCQVRQLNWQELQQTPHPLLLTLQHEGQRAYVVL HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHCCCCCEEEEEEECCCEEEEEE LEVNSERVVLLTGEQRLTFTVPQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIAVLDQLL EEECCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH AKALNDEPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRDFTK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AEKQGEEQAMRYPEFPSLAPLPRTYPLAETGDAINVADQTSPTLVASPSIPSEEKKTADE HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHH RLFENLDLSGLSPELAQKVENALLVETQTDHSPQTESTVSRLDLSAEKWHGRLPPLNLQT HHHHCCCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCEE HMYSSDPKRRWLKINGAEFHQGEWIDNQIQLVEISAQSVIVEFQGEQIEIPALYEWKG CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]