| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37678701
Identifier: 37678701
GI number: 37678701
Start: 504132
End: 505373
Strand: Direct
Name: 37678701
Synonym: VV0517
Alternate gene names: NA
Gene position: 504132-505373 (Clockwise)
Preceding gene: 37678700
Following gene: 37678712
Centisome position: 15.03
GC content: 43.8
Gene sequence:
>1242_bases GTGGGATGTACCCCACAAGCTGTCATTCTTATTTATCATTACTATTGCTGGCTTCGAGAGTTTCTCTTAACGTTTCAGTA TTGCCCAAGGAACGAGTTATCGTTAATGCTCAACGAAAAGTTTAGAATGCCCGTTATCAAGTTGGGCAACCCATTTTTAC CTTCGCCGGATGAAGTCTCAGCGTTTTTGGGACTCCCTGTTTCTCCAAGAGAAAAAATAAAGTGGTTAAATGCGTCAGTG GTCAAGAGTAAGCTGCCGACAGACCGCACGCTTGATAACATAAGTAAGGAGGGAATACGGTGGAAATCGATACGTCAGTT TGCTTGGCAATTGGCGAGAGTGTTTGTTCGTAAAGGATGGTCCCTTAACGTTTCTCTCCCCGATGGTGGTATTCATAAAT CAGACTTATCTTTTTGGTGGTCACACACTCTTAAAGGCGTTCAGCAAGGGTTGTCTTCGACTTCTGGTGAGTTGAATCTC GGGCTCTTGGTTAGCTATATCGATAAGCGCTGCGTCGCTTATCAAAGACAGTTGGCTTTTATTCAGGATGCTCCCGATAT CAATGAGAACAACCAACATGAGTTAATTTCAGGTTATTACCTACCAGTCCTCGACTTTACGTTGCTTAGTGAGCAAGAAA AGGCGCTAGTAAAAAACTGGCTCAAATCCCCCAGTGAACTTGCCTCAAAAGAAACTGAGCAGGCGATGCTTTGTTTCTGT TATGATTTTTGGTTGTCCTTAATGTCGGTCATTGATGTCATGTTTCTTGAAGATTGGGATAAACACTATGCAGAATACAC TCCGAGTGTTCATGCGCAGCAGTACGGGTTGTTCGGGCAGGTTTTTAATAGAGAAGAAAGAACATTTCTTGGCAAGTTTT TTGGCCTAATAAAAGAGCAGACTAATCAAACTTACGCGCAGTTGTCAGAGTATGTTGTCTTACCCGTTAGTGAGTATGAA CGAAATGGTCTGTTAAAGCGCGATGTTCAACAGGCACGCTTTAAAGAGTGGCGTAGCGGAAAAAGCCTCCCTTCTGTAGA AGCCTTAAGTACGTTTTTTGCCAATATGGATGCAGGGCGTCAAGGTGCGGACTTACTGATATATGCATTGTTCATGAGAG CGCTCGATAAGGTGGGTAGTCGCTCTCTACCTGATATCTACACGAAGGTGGGTAGTCGCTCTCTACCTGATATCTACACG ACAAGTCGTTATCAACGTTACTTCCAACATTACGCTCCCTAG
Upstream 100 bases:
>100_bases GTTGAAAAGGTAAAAGCACACTCTGGTGTTGAAGGAAATGAGAGAGCTGACTTGTTAGCGGTTGAAGCCGCGGCGTTATA AGGTCAGTGGCACGCAGCTT
Downstream 100 bases:
>100_bases GCTGCGCTATGGCAGCCTAGGTTTGCTTCTATTTTTTGCTTGGCGGATTATTGGTCCGTCCACCACCTGAAGGATTCGAG GTGCCATTTTTGGTCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MGCTPQAVILIYHYYCWLREFLLTFQYCPRNELSLMLNEKFRMPVIKLGNPFLPSPDEVSAFLGLPVSPREKIKWLNASV VKSKLPTDRTLDNISKEGIRWKSIRQFAWQLARVFVRKGWSLNVSLPDGGIHKSDLSFWWSHTLKGVQQGLSSTSGELNL GLLVSYIDKRCVAYQRQLAFIQDAPDINENNQHELISGYYLPVLDFTLLSEQEKALVKNWLKSPSELASKETEQAMLCFC YDFWLSLMSVIDVMFLEDWDKHYAEYTPSVHAQQYGLFGQVFNREERTFLGKFFGLIKEQTNQTYAQLSEYVVLPVSEYE RNGLLKRDVQQARFKEWRSGKSLPSVEALSTFFANMDAGRQGADLLIYALFMRALDKVGSRSLPDIYTKVGSRSLPDIYT TSRYQRYFQHYAP
Sequences:
>Translated_413_residues MGCTPQAVILIYHYYCWLREFLLTFQYCPRNELSLMLNEKFRMPVIKLGNPFLPSPDEVSAFLGLPVSPREKIKWLNASV VKSKLPTDRTLDNISKEGIRWKSIRQFAWQLARVFVRKGWSLNVSLPDGGIHKSDLSFWWSHTLKGVQQGLSSTSGELNL GLLVSYIDKRCVAYQRQLAFIQDAPDINENNQHELISGYYLPVLDFTLLSEQEKALVKNWLKSPSELASKETEQAMLCFC YDFWLSLMSVIDVMFLEDWDKHYAEYTPSVHAQQYGLFGQVFNREERTFLGKFFGLIKEQTNQTYAQLSEYVVLPVSEYE RNGLLKRDVQQARFKEWRSGKSLPSVEALSTFFANMDAGRQGADLLIYALFMRALDKVGSRSLPDIYTKVGSRSLPDIYT TSRYQRYFQHYAP >Mature_412_residues GCTPQAVILIYHYYCWLREFLLTFQYCPRNELSLMLNEKFRMPVIKLGNPFLPSPDEVSAFLGLPVSPREKIKWLNASVV KSKLPTDRTLDNISKEGIRWKSIRQFAWQLARVFVRKGWSLNVSLPDGGIHKSDLSFWWSHTLKGVQQGLSSTSGELNLG LLVSYIDKRCVAYQRQLAFIQDAPDINENNQHELISGYYLPVLDFTLLSEQEKALVKNWLKSPSELASKETEQAMLCFCY DFWLSLMSVIDVMFLEDWDKHYAEYTPSVHAQQYGLFGQVFNREERTFLGKFFGLIKEQTNQTYAQLSEYVVLPVSEYER NGLLKRDVQQARFKEWRSGKSLPSVEALSTFFANMDAGRQGADLLIYALFMRALDKVGSRSLPDIYTKVGSRSLPDIYTT SRYQRYFQHYAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47822; Mature: 47691
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCTPQAVILIYHYYCWLREFLLTFQYCPRNELSLMLNEKFRMPVIKLGNPFLPSPDEVS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH AFLGLPVSPREKIKWLNASVVKSKLPTDRTLDNISKEGIRWKSIRQFAWQLARVFVRKGW HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SLNVSLPDGGIHKSDLSFWWSHTLKGVQQGLSSTSGELNLGLLVSYIDKRCVAYQRQLAF EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQDAPDINENNQHELISGYYLPVLDFTLLSEQEKALVKNWLKSPSELASKETEQAMLCFC HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YDFWLSLMSVIDVMFLEDWDKHYAEYTPSVHAQQYGLFGQVFNREERTFLGKFFGLIKEQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH TNQTYAQLSEYVVLPVSEYERNGLLKRDVQQARFKEWRSGKSLPSVEALSTFFANMDAGR HHHHHHHHHHHEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC QGADLLIYALFMRALDKVGSRSLPDIYTKVGSRSLPDIYTTSRYQRYFQHYAP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GCTPQAVILIYHYYCWLREFLLTFQYCPRNELSLMLNEKFRMPVIKLGNPFLPSPDEVS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH AFLGLPVSPREKIKWLNASVVKSKLPTDRTLDNISKEGIRWKSIRQFAWQLARVFVRKGW HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SLNVSLPDGGIHKSDLSFWWSHTLKGVQQGLSSTSGELNLGLLVSYIDKRCVAYQRQLAF EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IQDAPDINENNQHELISGYYLPVLDFTLLSEQEKALVKNWLKSPSELASKETEQAMLCFC HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YDFWLSLMSVIDVMFLEDWDKHYAEYTPSVHAQQYGLFGQVFNREERTFLGKFFGLIKEQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH TNQTYAQLSEYVVLPVSEYERNGLLKRDVQQARFKEWRSGKSLPSVEALSTFFANMDAGR HHHHHHHHHHHEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC QGADLLIYALFMRALDKVGSRSLPDIYTKVGSRSLPDIYTTSRYQRYFQHYAP CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA