| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678698
Identifier: 37678698
GI number: 37678698
Start: 502683
End: 503318
Strand: Direct
Name: 37678698
Synonym: VV0514
Alternate gene names: NA
Gene position: 502683-503318 (Clockwise)
Preceding gene: 37678696
Following gene: 37678699
Centisome position: 14.99
GC content: 45.28
Gene sequence:
>636_bases ATGCCTATGTCATTCACACACAAAAAGGCATTACTCATGGCGAATAGAACCTACCTCCCAAGCATTACTCTTGATAGAAC TTTTGAAGATTACCCGCTGTATTACAGCGACAAGGGGTTATACGAGTCAGCACTGACCTCAATGGTCGATGTTTTTGAAC AGGCACTCAGTCAGTTTGACATCGCTCTTGCTACACGTTTGGACTTGTTTTTGCCAGAAGACCATCAAGATACCGACCTC AGTATCCTCAACGATTATTTTAATCTGCTTAAAGAAAAGCTTGATACGGATTCTCTGTTTTATGTATGGCGTAAGCGTGA AGACAAGGTGCCATCCCACAACTATCGCGTGATGCTGTTTAGTGACTATAGCCAGCACTTTGGTCCCGCTATTTGTTGGG ACAAGCGCAATGAATTGGTCGGGCACCTTAAAACGGCTTGGCAAGAAGCGATAGAAAAGCACTACAGCGGCGAAGCGCGT TCATTGGTGTTTCTCAATGACCGAGGCAATTATGGGGTAGGGACTCGTTGTCGTAGTAAAGACGTCAACATAAAGAACAC TGTCTTCCACCGCATGAGCAGTCTTGCTGAAGCGTGGGAAGAAAAGCGTTACTGCTTTGGTTCTAGCTTGGAATAG
Upstream 100 bases:
>100_bases AATCAGTCGTCTCGCGAAGCCCATTACCAACTTGAACGATCACCGAAACAAGAGCTTTGGTTGCAGTCACGACTGACCTT AAAAAAATACAACGCGAGCA
Downstream 100 bases:
>100_bases ACCGACTGCATTTTTTTACAATGGCGGCTTATCACATGGGTATATACAAAGCAGGAGACGATTCCCAGTGAAAATGAAAT TTCTACGACTTAAAGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPMSFTHKKALLMANRTYLPSITLDRTFEDYPLYYSDKGLYESALTSMVDVFEQALSQFDIALATRLDLFLPEDHQDTDL SILNDYFNLLKEKLDTDSLFYVWRKREDKVPSHNYRVMLFSDYSQHFGPAICWDKRNELVGHLKTAWQEAIEKHYSGEAR SLVFLNDRGNYGVGTRCRSKDVNIKNTVFHRMSSLAEAWEEKRYCFGSSLE
Sequences:
>Translated_211_residues MPMSFTHKKALLMANRTYLPSITLDRTFEDYPLYYSDKGLYESALTSMVDVFEQALSQFDIALATRLDLFLPEDHQDTDL SILNDYFNLLKEKLDTDSLFYVWRKREDKVPSHNYRVMLFSDYSQHFGPAICWDKRNELVGHLKTAWQEAIEKHYSGEAR SLVFLNDRGNYGVGTRCRSKDVNIKNTVFHRMSSLAEAWEEKRYCFGSSLE >Mature_210_residues PMSFTHKKALLMANRTYLPSITLDRTFEDYPLYYSDKGLYESALTSMVDVFEQALSQFDIALATRLDLFLPEDHQDTDLS ILNDYFNLLKEKLDTDSLFYVWRKREDKVPSHNYRVMLFSDYSQHFGPAICWDKRNELVGHLKTAWQEAIEKHYSGEARS LVFLNDRGNYGVGTRCRSKDVNIKNTVFHRMSSLAEAWEEKRYCFGSSLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24743; Mature: 24612
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSFTHKKALLMANRTYLPSITLDRTFEDYPLYYSDKGLYESALTSMVDVFEQALSQFD CCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH IALATRLDLFLPEDHQDTDLSILNDYFNLLKEKLDTDSLFYVWRKREDKVPSHNYRVMLF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEE SDYSQHFGPAICWDKRNELVGHLKTAWQEAIEKHYSGEARSLVFLNDRGNYGVGTRCRSK ECCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC DVNIKNTVFHRMSSLAEAWEEKRYCFGSSLE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PMSFTHKKALLMANRTYLPSITLDRTFEDYPLYYSDKGLYESALTSMVDVFEQALSQFD CCCCCHHHHHHHCCCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH IALATRLDLFLPEDHQDTDLSILNDYFNLLKEKLDTDSLFYVWRKREDKVPSHNYRVMLF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEE SDYSQHFGPAICWDKRNELVGHLKTAWQEAIEKHYSGEARSLVFLNDRGNYGVGTRCRSK ECCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC DVNIKNTVFHRMSSLAEAWEEKRYCFGSSLE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA