Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678693

Identifier: 37678693

GI number: 37678693

Start: 498755

End: 499471

Strand: Direct

Name: 37678693

Synonym: VV0509

Alternate gene names: NA

Gene position: 498755-499471 (Clockwise)

Preceding gene: 37678691

Following gene: 37678695

Centisome position: 14.87

GC content: 44.49

Gene sequence:

>717_bases
ATGAGAGAAATGACAACCAAAGCCGCGTTGATTCTAGGTGTATCCCTAATTGTCGGCTTAGGCGTATTGGGTTATCTAGT
TCAGCAAACGGCCATTCAATACAAAGCACTGGATCGCATTGTGACGGTTAAGGGGTTATCGGAGAGAGAGTATCCTGCTG
ATACGGTCATTTGGCCGATCCGTTTTACGGTTGCCAGCAATGACATCCAAGATCTTTTCACCAAAGTGGATACGCAATCA
ACGTTAATCACCGATTTTCTCAATAAACGTGAACTTTCAGATAGTGTCCAATGGTCTGCCCCTGCGGTGATTGATAAGAA
AGCTCAGCAATATGGGGGAGAAGCAAATGCGGAATATCGCTATCTCGCCATTCAAACCATCACGGTGTACAGCAATAAAG
TTGATTCGGTACGTCAAGCCATCAGTCTTATTGGACAACTGGGCAAGAAGGGGATTGTTTTCAACCAAGATTCTTACGAC
AGCCCGATTGTCTACAGCTTCACTCGCTTAAACGAAATTAAGCCGGAAATGATCGAAGAAGCCACTCACAATGCGAGAGA
GGTGGCTGAGAAGTTTGCCAAAGATTCCAATAGTTCACTTGGCAAAATCCGCACAGCATCACAAGGCCAGTTTTCTATCA
TGGATAGAGATCACAACACGCCACATATTAAACGCATTCGTGTGGTTTCGACGGTTCAATACTATCTTTCTGATTGA

Upstream 100 bases:

>100_bases
TCCGTTTCTTTATCTAATTAGTGCCATGTCTCAGTACTGAAGAACTAACTACGCTATGTTGTAGGATTCGAAAGTTTTGG
TAATTTTTAAAGGTTAGGTT

Downstream 100 bases:

>100_bases
TTAAGGGAAGTGCCTAATGAACCAAAGCTTACCGGAAGTACTCACAGACCAAGTATAGACCGGACTAGAAAAGACAAAGG
CTCGTAGATTTCTCCACGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MREMTTKAALILGVSLIVGLGVLGYLVQQTAIQYKALDRIVTVKGLSEREYPADTVIWPIRFTVASNDIQDLFTKVDTQS
TLITDFLNKRELSDSVQWSAPAVIDKKAQQYGGEANAEYRYLAIQTITVYSNKVDSVRQAISLIGQLGKKGIVFNQDSYD
SPIVYSFTRLNEIKPEMIEEATHNAREVAEKFAKDSNSSLGKIRTASQGQFSIMDRDHNTPHIKRIRVVSTVQYYLSD

Sequences:

>Translated_238_residues
MREMTTKAALILGVSLIVGLGVLGYLVQQTAIQYKALDRIVTVKGLSEREYPADTVIWPIRFTVASNDIQDLFTKVDTQS
TLITDFLNKRELSDSVQWSAPAVIDKKAQQYGGEANAEYRYLAIQTITVYSNKVDSVRQAISLIGQLGKKGIVFNQDSYD
SPIVYSFTRLNEIKPEMIEEATHNAREVAEKFAKDSNSSLGKIRTASQGQFSIMDRDHNTPHIKRIRVVSTVQYYLSD
>Mature_238_residues
MREMTTKAALILGVSLIVGLGVLGYLVQQTAIQYKALDRIVTVKGLSEREYPADTVIWPIRFTVASNDIQDLFTKVDTQS
TLITDFLNKRELSDSVQWSAPAVIDKKAQQYGGEANAEYRYLAIQTITVYSNKVDSVRQAISLIGQLGKKGIVFNQDSYD
SPIVYSFTRLNEIKPEMIEEATHNAREVAEKFAKDSNSSLGKIRTASQGQFSIMDRDHNTPHIKRIRVVSTVQYYLSD

Specific function: Unknown

COG id: COG2859

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26733; Mature: 26733

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREMTTKAALILGVSLIVGLGVLGYLVQQTAIQYKALDRIVTVKGLSEREYPADTVIWPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEE
RFTVASNDIQDLFTKVDTQSTLITDFLNKRELSDSVQWSAPAVIDKKAQQYGGEANAEYR
EEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEE
YLAIQTITVYSNKVDSVRQAISLIGQLGKKGIVFNQDSYDSPIVYSFTRLNEIKPEMIEE
EEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEHHHHHCCHHHHHH
ATHNAREVAEKFAKDSNSSLGKIRTASQGQFSIMDRDHNTPHIKRIRVVSTVQYYLSD
HHCCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MREMTTKAALILGVSLIVGLGVLGYLVQQTAIQYKALDRIVTVKGLSEREYPADTVIWPI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEE
RFTVASNDIQDLFTKVDTQSTLITDFLNKRELSDSVQWSAPAVIDKKAQQYGGEANAEYR
EEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEE
YLAIQTITVYSNKVDSVRQAISLIGQLGKKGIVFNQDSYDSPIVYSFTRLNEIKPEMIEE
EEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEHHHHHCCHHHHHH
ATHNAREVAEKFAKDSNSSLGKIRTASQGQFSIMDRDHNTPHIKRIRVVSTVQYYLSD
HHCCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA