| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678675
Identifier: 37678675
GI number: 37678675
Start: 475438
End: 475995
Strand: Direct
Name: 37678675
Synonym: VV0491
Alternate gene names: NA
Gene position: 475438-475995 (Clockwise)
Preceding gene: 37678674
Following gene: 37678676
Centisome position: 14.17
GC content: 49.46
Gene sequence:
>558_bases ATGGCAACAATGAAATCGATCAACACGCTGCGTCTGCCGATACAACGTATTGCAGACTTTGACTTTGCGCTTTCTAGCTT TTGCTTAAAACATAGATTCAATTACCAAGTGGCAACCATCAGCAAAGCGATTTCCCACAGTGGCGATGGGCACCTTTACG CCTTGATTGGACTGGCCGCATGGCTGGCTATTCCTTCACTAGGAACGTGGTTTTTGCTCTGTGGTTTGCTGGCCTTTGTC ATCGAGTTGCCCATTTATTGGGGGCTCAAAAACAGTTTCAAGCGCCGTCGCCCAGAAGAGTACAGTGCCTATTTGCCCGC TTTTATCACCCCTTCAGATCGCTACAGTTTGCCCTCTGGTCACACCGCCGCAGGGTTTGTCATGGCCACCATCACAAGTT ACTTCTTCCCAGAGTTGACATGGTTTGCGTTTAGCTGGGCGACCCTGATCGGGTTGTCACGCATTTTACTGGGCGTGCAT TTTTTTAGTGACATTGTGATTGGTGCTCTGCTCGGTCATGCCTGTGCCACTTTGGCCTTGATTCTTGTGATGGAGTGA
Upstream 100 bases:
>100_bases CTTATCAAGGATTCATGGCGTTGTCACTAAATCGCCAAATTCCTTTCATGGGATTGTCACTCTGGTTTCCTAGCTTAGTA GCAGGAGAACGACATTCAGG
Downstream 100 bases:
>100_bases GCCTATGAAAATTCTGTATGGCGTACAAGGCACGGGGAATGGTCATATCGCCCGTGCTCGGGCAATGGCAAACGCTTTTG CGGCGCAGCATTGCCAAGTG
Product: membrane-associated phospholipid phosphatase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Membrane-Associated Phospholipid Phosphatase; PAP2 Family Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily Protein; Phospholipid Phosphatase; Acid Phosphatase-Like Protein; Type II Phosphatidic Acid Phosphatase; PAP2 Family Phosphoesterase; Phosphatidylglycerophosphatase B; Phosphoesterase Family Protein
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MATMKSINTLRLPIQRIADFDFALSSFCLKHRFNYQVATISKAISHSGDGHLYALIGLAAWLAIPSLGTWFLLCGLLAFV IELPIYWGLKNSFKRRRPEEYSAYLPAFITPSDRYSLPSGHTAAGFVMATITSYFFPELTWFAFSWATLIGLSRILLGVH FFSDIVIGALLGHACATLALILVME
Sequences:
>Translated_185_residues MATMKSINTLRLPIQRIADFDFALSSFCLKHRFNYQVATISKAISHSGDGHLYALIGLAAWLAIPSLGTWFLLCGLLAFV IELPIYWGLKNSFKRRRPEEYSAYLPAFITPSDRYSLPSGHTAAGFVMATITSYFFPELTWFAFSWATLIGLSRILLGVH FFSDIVIGALLGHACATLALILVME >Mature_184_residues ATMKSINTLRLPIQRIADFDFALSSFCLKHRFNYQVATISKAISHSGDGHLYALIGLAAWLAIPSLGTWFLLCGLLAFVI ELPIYWGLKNSFKRRRPEEYSAYLPAFITPSDRYSLPSGHTAAGFVMATITSYFFPELTWFAFSWATLIGLSRILLGVHF FSDIVIGALLGHACATLALILVME
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20586; Mature: 20455
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMKSINTLRLPIQRIADFDFALSSFCLKHRFNYQVATISKAISHSGDGHLYALIGLAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH WLAIPSLGTWFLLCGLLAFVIELPIYWGLKNSFKRRRPEEYSAYLPAFITPSDRYSLPSG HHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHCCEEECCCCCCCCCCC HTAAGFVMATITSYFFPELTWFAFSWATLIGLSRILLGVHFFSDIVIGALLGHACATLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVME HHHCC >Mature Secondary Structure ATMKSINTLRLPIQRIADFDFALSSFCLKHRFNYQVATISKAISHSGDGHLYALIGLAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH WLAIPSLGTWFLLCGLLAFVIELPIYWGLKNSFKRRRPEEYSAYLPAFITPSDRYSLPSG HHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHCCEEECCCCCCCCCCC HTAAGFVMATITSYFFPELTWFAFSWATLIGLSRILLGVHFFSDIVIGALLGHACATLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVME HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA