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The map label for this gene is yrbA [H]

Identifier: 37678644

GI number: 37678644

Start: 446181

End: 446435

Strand: Direct

Name: yrbA [H]

Synonym: VV0460

Alternate gene names: 37678644

Gene position: 446181-446435 (Clockwise)

Preceding gene: 37678643

Following gene: 37678645

Centisome position: 13.3

GC content: 45.1

Gene sequence:

>255_bases
GTGGATAGCGCAAAAGTACAACAGTTACTAGAAGAAGCACTCAACCTTGAAGAGTTGCATGTAAAAGGTGAAGGTAGCCA
CTATGAAGTGGTCGCTGTTGATGCTTGTTTCGAAGGAATGAGCCGCGTTAAGAAGCAACAGCTGATCTACAAACCACTCA
TGGACTACATCCAACGCAATGATATTCATGCCTTGTCGATCAAAGCATACACGCCCGCCGAATGGGCACGTGACAAGAAA
CTGATGTCTCTTTAA

Upstream 100 bases:

>100_bases
AATGCTGAGTTTTGTGCCAGCGCAACTGCGCACACTGTTTCAGTTAAGCAACGTTGAAGCCGTGGTTGCCAAACATATTC
AAAGTTATCAGGGGTAAATT

Downstream 100 bases:

>100_bases
GGTTTTATAATGGAAAAGTTCCGTGTAATTGGGTCGACTCAGCCATTGATGGGTGAGGTGACTATTTCAGGTGCCAAAAA
CGCTGCACTGCCGATTTTAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MDSAKVQQLLEEALNLEELHVKGEGSHYEVVAVDACFEGMSRVKKQQLIYKPLMDYIQRNDIHALSIKAYTPAEWARDKK
LMSL

Sequences:

>Translated_84_residues
MDSAKVQQLLEEALNLEELHVKGEGSHYEVVAVDACFEGMSRVKKQQLIYKPLMDYIQRNDIHALSIKAYTPAEWARDKK
LMSL
>Mature_84_residues
MDSAKVQQLLEEALNLEELHVKGEGSHYEVVAVDACFEGMSRVKKQQLIYKPLMDYIQRNDIHALSIKAYTPAEWARDKK
LMSL

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=81, Percent_Identity=62.962962962963, Blast_Score=117, Evalue=1e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9664; Mature: 9664

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSAKVQQLLEEALNLEELHVKGEGSHYEVVAVDACFEGMSRVKKQQLIYKPLMDYIQRN
CCHHHHHHHHHHHCCHHHEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIHALSIKAYTPAEWARDKKLMSL
CCCEEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDSAKVQQLLEEALNLEELHVKGEGSHYEVVAVDACFEGMSRVKKQQLIYKPLMDYIQRN
CCHHHHHHHHHHHCCHHHEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DIHALSIKAYTPAEWARDKKLMSL
CCCEEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]