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The map label for this gene is ytfB [H]

Identifier: 37678587

GI number: 37678587

Start: 399501

End: 400091

Strand: Direct

Name: ytfB [H]

Synonym: VV0403

Alternate gene names: 37678587

Gene position: 399501-400091 (Clockwise)

Preceding gene: 37678584

Following gene: 37678588

Centisome position: 11.91

GC content: 46.02

Gene sequence:

>591_bases
GTGCAAAGGGTTTGGAGAAGCACTAGCATGAATCGACGTAGAAAGAAGAAGGCTCAGGTAGATTATCTGGCGCTGTGTAA
ACAGCGTATTGCTCAATTTGATTACCAGCGTATTTTGTCCAACGTAAAGCAGTTTTGGGCAACGTTGCCACGTTTACATC
AACGTGCGCTTTATGTTTTGGTTCCTGTCCTGTTTGTCTTGTTACTGTGGCCAAGTAGCGAACCAGAGCTCAAAGTGTCA
GAGCCTAGCACGCCGCAGCGTATTGCTTTGGATATTGATACTACCGGGTTAAGCCAGCAACGCACAGAAGAGCAGAACAA
CTTAAAGTCCAATAGCTGGAAGGAATACCTAGTGCGTGATGGTGACACTCTTTCTCAGGTGTTTCGTAATAATCAATTGT
CGATGTCGGATCTCAATGCACTGGTGCGCATCGAAGGGGATGACAAACCGCTCAGCCAGATCAAACAAGGTCAGTTGGTG
CGTTTTAAGCTCAATGACACTGGTCAATTGGACATTTTACAGTTGGAAAAAGGTACCACTTCAGTGATGTTTTTCCGCTT
GTCTGATGGTGGTTTTGGCCGCAGCAAGTAG

Upstream 100 bases:

>100_bases
AAGGAACGTTTTCCTTCACGCTTTTTAACCATTTTTACCTTGTAATGACTCACTGTCATCGGAAAGCACTATACTCAGCC
AATTTGTATTTTTATACTGA

Downstream 100 bases:

>100_bases
CGCTGCGGTGTTATGAATCAGTCCCAATAAGGCGCGTTGAGCGCCTTATTGCGTTTATGCGAGCTCTCTTTTTCTAGCTT
GATGATGGAGAGCGATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQRVWRSTSMNRRRKKKAQVDYLALCKQRIAQFDYQRILSNVKQFWATLPRLHQRALYVLVPVLFVLLLWPSSEPELKVS
EPSTPQRIALDIDTTGLSQQRTEEQNNLKSNSWKEYLVRDGDTLSQVFRNNQLSMSDLNALVRIEGDDKPLSQIKQGQLV
RFKLNDTGQLDILQLEKGTTSVMFFRLSDGGFGRSK

Sequences:

>Translated_196_residues
MQRVWRSTSMNRRRKKKAQVDYLALCKQRIAQFDYQRILSNVKQFWATLPRLHQRALYVLVPVLFVLLLWPSSEPELKVS
EPSTPQRIALDIDTTGLSQQRTEEQNNLKSNSWKEYLVRDGDTLSQVFRNNQLSMSDLNALVRIEGDDKPLSQIKQGQLV
RFKLNDTGQLDILQLEKGTTSVMFFRLSDGGFGRSK
>Mature_196_residues
MQRVWRSTSMNRRRKKKAQVDYLALCKQRIAQFDYQRILSNVKQFWATLPRLHQRALYVLVPVLFVLLLWPSSEPELKVS
EPSTPQRIALDIDTTGLSQQRTEEQNNLKSNSWKEYLVRDGDTLSQVFRNNQLSMSDLNALVRIEGDDKPLSQIKQGQLV
RFKLNDTGQLDILQLEKGTTSVMFFRLSDGGFGRSK

Specific function: Unknown

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082389, Length=191, Percent_Identity=27.7486910994764, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 22745; Mature: 22745

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVWRSTSMNRRRKKKAQVDYLALCKQRIAQFDYQRILSNVKQFWATLPRLHQRALYVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPVLFVLLLWPSSEPELKVSEPSTPQRIALDIDTTGLSQQRTEEQNNLKSNSWKEYLVRD
HHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHCC
GDTLSQVFRNNQLSMSDLNALVRIEGDDKPLSQIKQGQLVRFKLNDTGQLDILQLEKGTT
CHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEEECCCCC
SVMFFRLSDGGFGRSK
EEEEEEECCCCCCCCC
>Mature Secondary Structure
MQRVWRSTSMNRRRKKKAQVDYLALCKQRIAQFDYQRILSNVKQFWATLPRLHQRALYVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPVLFVLLLWPSSEPELKVSEPSTPQRIALDIDTTGLSQQRTEEQNNLKSNSWKEYLVRD
HHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHCC
GDTLSQVFRNNQLSMSDLNALVRIEGDDKPLSQIKQGQLVRFKLNDTGQLDILQLEKGTT
CHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEEECCCCC
SVMFFRLSDGGFGRSK
EEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]