| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is mpg1 [H]
Identifier: 37678498
GI number: 37678498
Start: 323240
End: 324301
Strand: Direct
Name: mpg1 [H]
Synonym: VV0314
Alternate gene names: 37678498
Gene position: 323240-324301 (Clockwise)
Preceding gene: 37678497
Following gene: 37678499
Centisome position: 9.64
GC content: 45.86
Gene sequence:
>1062_bases ATGAAAAATAATTGGAAGAAGGCAGTTCTGTCGCCAGATGCAACAATAAAAGAAGCATTACGTGTTATTGATGCAGAATC GCTTCGCGTTGCCCTTGTTGTTGATGAGAAAGGGATACTCCAAGGTGTTGTGACTGATGGCGATATCCGAAGAGGGCTGC TTGCTGGCAAGGCACTGGAGACGATGCTATCTGAAGTAATGAATCGTAAGCCTATCACGGCAAGTGTTTCTGCGGATCGT GATGATTTAATTGCGAGAATGAACAAAAGTGATTTGCTGTTTATCCCTCTTGTAGATGGTCCTTACTTAGCTGGTCTAGC AACTCTGCATGGAGCATTAGTTGATAAGCCACTATATCAAAATCCGGTATTTTTGATGGCGGGCGGATTTGGTACTCGTT TGCGTCCGCTGACGGATAGCTGTCCAAAGCCCATGCTCAAAATCGGCAACAAACCGATCCTTGAAACGGTGATCCGTAGT TTTATTAAGGCGGGCTTCGTCAATTTCTATATCTCAACTCACTACATGCCAGAGTTGATCCATGCTCACTTTGGTGATGG TTCAGGGTTCGGTGTCAATATCACGTATGTCCACGAGGAGTCACCATTGGGCACTGGTGGTGCGCTGGGATTATTGCCGA AAGATCTGCCAAAAGATTTGCCGCTTATTATGATGAATGGTGATGTGCTGACCAAGGTCGATTTTCAACGCCTTCTCGAT TTTCACGTGACCCATGACGCCGACGCAACCATGTGTGTTCGCGAATACGACTATCAAATTCCCTACGGCGTGATCAACGG CGAAGGCAACAAAATTACCAGCATGGTGGAGAAGCCGATTCAACGTTTCTTTGTCAATGCAGGGATTTACGTGGTTTCTC CGAGAGTCATTCAATCGGTACCCGAAAATCATCGTATTGATATGCCGACGCTATTAGAACAACACATGCAGGAAAGAAAC AACGTCTTGATGTTCCCAATTCACGAGTACTGGCTGGATATCGGCCGAATGGATGATTTCAATCGAGCGCAAGCGGACAT TCATACTTTGGGATTGGACTAA
Upstream 100 bases:
>100_bases GATGCAGTATTGTGGGAGCTGGAGTCACTATTCGTAGCAATGTTGTTGCAGATATGACTGTGAGTGGGAAAGTCGTAGCA AGGTAATAAGTTGGTTAGAA
Downstream 100 bases:
>100_bases TGGAACGAGTTGCTGTTGTTGGGCTAGGAAATATCGCGACTCGCCATCGACGGAATTTAAAACATTTATTCCCCAGCGCA CTGCTGTATGCGATGTCGGC
Product: putative sugar-phosphate nucleotide transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKNNWKKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALETMLSEVMNRKPITASVSADR DDLIARMNKSDLLFIPLVDGPYLAGLATLHGALVDKPLYQNPVFLMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRS FIKAGFVNFYISTHYMPELIHAHFGDGSGFGVNITYVHEESPLGTGGALGLLPKDLPKDLPLIMMNGDVLTKVDFQRLLD FHVTHDADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQRFFVNAGIYVVSPRVIQSVPENHRIDMPTLLEQHMQERN NVLMFPIHEYWLDIGRMDDFNRAQADIHTLGLD
Sequences:
>Translated_353_residues MKNNWKKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALETMLSEVMNRKPITASVSADR DDLIARMNKSDLLFIPLVDGPYLAGLATLHGALVDKPLYQNPVFLMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRS FIKAGFVNFYISTHYMPELIHAHFGDGSGFGVNITYVHEESPLGTGGALGLLPKDLPKDLPLIMMNGDVLTKVDFQRLLD FHVTHDADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQRFFVNAGIYVVSPRVIQSVPENHRIDMPTLLEQHMQERN NVLMFPIHEYWLDIGRMDDFNRAQADIHTLGLD >Mature_353_residues MKNNWKKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALETMLSEVMNRKPITASVSADR DDLIARMNKSDLLFIPLVDGPYLAGLATLHGALVDKPLYQNPVFLMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRS FIKAGFVNFYISTHYMPELIHAHFGDGSGFGVNITYVHEESPLGTGGALGLLPKDLPKDLPLIMMNGDVLTKVDFQRLLD FHVTHDADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQRFFVNAGIYVVSPRVIQSVPENHRIDMPTLLEQHMQERN NVLMFPIHEYWLDIGRMDDFNRAQADIHTLGLD
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=230, Percent_Identity=33.4782608695652, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI11761619, Length=230, Percent_Identity=33.4782608695652, Blast_Score=123, Evalue=2e-28, Organism=Escherichia coli, GI1790224, Length=242, Percent_Identity=25.2066115702479, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1788351, Length=237, Percent_Identity=26.1603375527426, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI133931050, Length=232, Percent_Identity=30.1724137931034, Blast_Score=122, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6320148, Length=230, Percent_Identity=34.7826086956522, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI21355443, Length=228, Percent_Identity=32.8947368421053, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24644084, Length=228, Percent_Identity=32.8947368421053, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 39306; Mature: 39306
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNWKKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALE CCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHH TMLSEVMNRKPITASVSADRDDLIARMNKSDLLFIPLVDGPYLAGLATLHGALVDKPLYQ HHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC NPVFLMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKAGFVNFYISTHYMPELI CCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHH HAHFGDGSGFGVNITYVHEESPLGTGGALGLLPKDLPKDLPLIMMNGDVLTKVDFQRLLD HHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHH FHVTHDADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQRFFVNAGIYVVSPRVIQSV HHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHC PENHRIDMPTLLEQHMQERNNVLMFPIHEYWLDIGRMDDFNRAQADIHTLGLD CCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCHHHHHHEEECCC >Mature Secondary Structure MKNNWKKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALE CCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHH TMLSEVMNRKPITASVSADRDDLIARMNKSDLLFIPLVDGPYLAGLATLHGALVDKPLYQ HHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC NPVFLMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKAGFVNFYISTHYMPELI CCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHH HAHFGDGSGFGVNITYVHEESPLGTGGALGLLPKDLPKDLPLIMMNGDVLTKVDFQRLLD HHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHH FHVTHDADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQRFFVNAGIYVVSPRVIQSV HHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHC PENHRIDMPTLLEQHMQERNNVLMFPIHEYWLDIGRMDDFNRAQADIHTLGLD CCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]