Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is pagO [H]

Identifier: 37678442

GI number: 37678442

Start: 269057

End: 270097

Strand: Direct

Name: pagO [H]

Synonym: VV0258

Alternate gene names: 37678442

Gene position: 269057-270097 (Clockwise)

Preceding gene: 37678441

Following gene: 37678443

Centisome position: 8.02

GC content: 46.78

Gene sequence:

>1041_bases
ATGCCGTGCGAATTAGTCATGCGTGTGAATAGATTACTATTTGCACCACCTAGTTATAGGAATTCAAAAATGAAAACTCA
TCGATTTACTTTTGCTGAGTCTCTACCTGCGTTGTTGTTTCTCTCGGTATGTTTAATTTGGGGAACCACATGGTTTGCCA
TGGAGATTGCCGTGCAAACTATTCCGCCTATTTTCGCTACTGGGCTACGATTTTTGATTGCCGCCCCTCTGCTGCTCATA
CTCGGGCAACGTCTTAGACAGCCACTCTTTTTTCCAAAAGGAAAAATGCATTGGATGTTCATCGTCGCGATTTTTTATTT
TGCGATCCCGTTTACCTTGATGATTTTTGGTGAACAGTATATTTCGTCAGGCTTGGCTTCGATTATTTTTGCCACCATGC
CTATCGCGGTGATGATCACGTCGAGATGGTTTCTCGGATTGACGTTGCGTCGTTTGCAAACGGCTGGACTGTTGATCGCC
GTACTCAGTTTGGTCCTGATTTTGGCGAAAGAGATGAGTCTGGGCGGAGACGATTATCTACTTGGTTTTCTTGCGCTTGG
TGGCGCAGTTGCCATTCATGCCGTGATGTATGTGTGCGTGCAGAAGTATTGCCAAGACATTCCAGTGTTGACTTACAACG
CGCTGCCGAGTTTGATGGCATCCATGCTGTTGTTGACGGCATCTTGGATAATTGAAAAGCCGGCGTTTTCAGTCTTCTCT
CAAGTGTCGATGCTATCTGTCGTTTACTTGGGGGTCTTTGCCAGCGTGGGTGGCATTGTGGCCTATTTCAAACTGGGCCA
GGTTTCAACGCCCTTTACCGCTTCGATTTGTTTCTTGTTTTTCCCGTTGATCGCACTGAGTCTTTCTACTTGGATGTCAG
GCAACAGTATTTCCTCGACCTCGGTGGTTTTGTTGTTGCCACTGCTCGGTGGGATTTTTGTGACCAAAGCAGAACCTCAG
TTTTGGGCTCGTTTTGGCCGCAAGCGCATTAAGTCAAAGCCAGTGCTGTGCAAGCGATGCATGAAGGAGCTGAACGTTTA
G

Upstream 100 bases:

>100_bases
TGTCATTTACACCAGCGCAGAGATGCGCACCCACTATCGTCCCCCAATAGCGTAATTCCTATCTCGCAGTGGTTTACTGC
CCACAACCTTATTGCGCGCT

Downstream 100 bases:

>100_bases
ACGAGAACGTTATCCAAAACAAAGCCCCGAATCTCGGGGCTTTATCAAATCGTTATAGAGTCAGAACCTATTCGATGTTT
TGGATCTGCTCATTGAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MPCELVMRVNRLLFAPPSYRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQTIPPIFATGLRFLIAAPLLLI
LGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQYISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIA
VLSLVLILAKEMSLGGDDYLLGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS
QVSMLSVVYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISSTSVVLLLPLLGGIFVTKAEPQ
FWARFGRKRIKSKPVLCKRCMKELNV

Sequences:

>Translated_346_residues
MPCELVMRVNRLLFAPPSYRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQTIPPIFATGLRFLIAAPLLLI
LGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQYISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIA
VLSLVLILAKEMSLGGDDYLLGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS
QVSMLSVVYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISSTSVVLLLPLLGGIFVTKAEPQ
FWARFGRKRIKSKPVLCKRCMKELNV
>Mature_345_residues
PCELVMRVNRLLFAPPSYRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQTIPPIFATGLRFLIAAPLLLIL
GQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQYISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIAV
LSLVLILAKEMSLGGDDYLLGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFSQ
VSMLSVVYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISSTSVVLLLPLLGGIFVTKAEPQF
WARFGRKRIKSKPVLCKRCMKELNV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 38419; Mature: 38288

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCELVMRVNRLLFAPPSYRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQT
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPPIFATGLRFLIAAPLLLILGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIAVLSLVLILAKEMSLGGDDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSMLSVVYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISST
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SVVLLLPLLGGIFVTKAEPQFWARFGRKRIKSKPVLCKRCMKELNV
HHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
PCELVMRVNRLLFAPPSYRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQT
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9712687; 11677609 [H]