| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678396
Identifier: 37678396
GI number: 37678396
Start: 224117
End: 224257
Strand: Direct
Name: 37678396
Synonym: VV0212
Alternate gene names: NA
Gene position: 224117-224257 (Clockwise)
Preceding gene: 37678395
Following gene: 37678397
Centisome position: 6.68
GC content: 43.26
Gene sequence:
>141_bases GTGCGAGCGATTATCTTCAGTCGAATAAAGAAAGATAAATCGCAGTGCGTTCAAGCAAAGAAAGCGAAAGCGCAAAATTT AAACAGTGAAAGGAACCGATTGAGTGAAACCATCAGAGCTGAGTGCCGGATTGGCCAATAG
Upstream 100 bases:
>100_bases TGATATAGTGCAAAGCTCTGTGTCGAAGCGAGATTTATCGACGCAACAACAGCATAACGTGCTGTTTTAGGAGAGCATTT TTCCACCTTGATAAGGAAAA
Downstream 100 bases:
>100_bases CCCATTGCTGACGCGGATGATTGCCAACAACGGCATGATTCAGAGTCGAGCGAGTGCTTTATTAGCTGGCGTGCTGGTGG CTTTGACAGGCTGGACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MRAIIFSRIKKDKSQCVQAKKAKAQNLNSERNRLSETIRAECRIGQ
Sequences:
>Translated_46_residues MRAIIFSRIKKDKSQCVQAKKAKAQNLNSERNRLSETIRAECRIGQ >Mature_46_residues MRAIIFSRIKKDKSQCVQAKKAKAQNLNSERNRLSETIRAECRIGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5319; Mature: 5319
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIIFSRIKKDKSQCVQAKKAKAQNLNSERNRLSETIRAECRIGQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRAIIFSRIKKDKSQCVQAKKAKAQNLNSERNRLSETIRAECRIGQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA