| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is luxQ [H]
Identifier: 37678325
GI number: 37678325
Start: 151234
End: 153030
Strand: Direct
Name: luxQ [H]
Synonym: VV0141
Alternate gene names: 37678325
Gene position: 151234-153030 (Clockwise)
Preceding gene: 37678324
Following gene: 37678327
Centisome position: 4.51
GC content: 37.9
Gene sequence:
>1797_bases GTGAATTATAAATACTCACAAAAGTTCAATGTTATGGAAGCTTTAATTGCGCTAGCAATAGGCATAACTCTCAGTTTTTT CTTTTCATTTAAAACTCAAAACTCCCTTCTAGAGGCCACTGAAAGCTCAATCGTTGCTCATTCTGCAAGCCTTGTCCACA TGAGAAGCTATATACATTTAACTCAGAGAGAAGATGGTGACCACAAGATAAATAAACTACTTTCTGAAATACAAAAGCTA ACCTCTGAGTTAAACACTTTAAAAGAAGCTAGCAACGACATTAACGTTAGATTTCCTCAAATGATTTGGGTAGGAAATCC CCTCCCTTCTGTAGTTGAGGAGTACGTAAAAACTGCGGATAAACAGTTGGTATTTCTTGATAAAATGCTTAAAGCAAAAC AACAGATAGTACCAGAGGTTTCATTAATCGAATTAGAGAGGCAGGTGTTTTCAGAAGAGATGGATGAAGCAGCGGAACAT GTTCATGAACGTTTGATGGATAACATCTTCTTAACCAGTAAAGCAGCCGTCTATACTTTAATACTATTCATTATTTTAAT ATTCTCTGCCGTTTTTCTTTATCTCAATCATTACATTATAGAGTTGAAGAAGACCAAGCTAGCATTACAGGTAGCTGTAA ATAAGGCAGAGGAAGCCAACTTAGCTAAGTCTATGTTTTTAGCAACAATGAGTCATGAGATAAGAACTCCAATGAATGGT GTTATAGGAATGACACAGTTACTCATATCGGATAATAAAGATCCAAGTATTCAGACGCACTTAGATACGCTATTGGAGTC AGGTGAACACCTAATGGTGGTCATAAACGAAATTCTTGATTTTTCAAATCTAGAACAAGGAAGTTTAGTTTTTGTTCAGG AAGAATTTGAGCTAAGCAAACTATTGGTCCCTATAAAAAATTCTTTTCAACCACAGGCTTCTGAAAAAAAACTTCAGCTT ATATTCGACACCAATAGCTTGCCTGAAGATCTAATTTTAGTTGGTGATAAAACTCGTATACGTCAAGTTATTTACAATTT AGTGGGTAATGCCATCAAGTTCACCTCTGATGGACAGGTTAAGGTTGTTTTAAAATATGAAAGTGATAAAAATGAGCTTT GTATTCAGGTATCTGATACCGGAATTGGCATACCATCCCATCGTTTAAAAGGCATTTTTAATGCGTTCGAACAAGCAGAT GTTAGAACGATGCACGATTTTGGAGGTACAGGGTTAGGTTTATCCATCGTGAAAAAAATATGCTTATCAATGGGGGGGGA TATTACTGTTACAAGTGAGTTAGGTTCAGGAAGCTGCTTTGTGGCAAAGGTGATAAGCCCAAGAGTAACCACCCTCCGAG ATCAAAGAACGCTCTCAGGCGAAAAAGACTTTTCCGGTAAGTCAGTCCTTATCGTTGAGGATAACCGTGTTAATCAGCTT GTTGCTCAACGATTGTGTCAAAAGTTAGGGTTTACTACCTATATTGCATCTAATGGTATAGAAGCTGTTAAAAGGGTGCG CGAATGTTCTTTTGACGTAATCTTGATGGATCATCAAATGCCACAAATGGGGGGCATAGAAGCGACAAAATTAATACGAA ATGAGCATGCTTTTCAGGGTATTATTCTTGGATGTACCGCTGATGTTACCAAAGATACAGCCATAGCATTCGTGGACGCT GGTGCCAATGGAGTAATAACAAAGCCCTTACAATTAGACTCTTTAGGGGAGTTAATAGCACGCAGCGTAACGCTGGCTTG TAATGCGAGTCGTGATCATCATGTCGTGTTGGAATAG
Upstream 100 bases:
>100_bases ACATTAATTGTTTGGTTATTGATGGTTGCTTGCTTTTTTTATTATATTGAAAAAGAAAGCTTTATACCTGTTATCCATGA ATTTCATCTGGAGGACTCAA
Downstream 100 bases:
>100_bases ATGTCAGTCCGACTCATATTGAATCAAAGAGTTGATTCTTTGAGTAAAAGAGATAGCCTCAATGCTAGAATGCGCTATTT TTTACGTCGTCTGTAGAGGG
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MNYKYSQKFNVMEALIALAIGITLSFFFSFKTQNSLLEATESSIVAHSASLVHMRSYIHLTQREDGDHKINKLLSEIQKL TSELNTLKEASNDINVRFPQMIWVGNPLPSVVEEYVKTADKQLVFLDKMLKAKQQIVPEVSLIELERQVFSEEMDEAAEH VHERLMDNIFLTSKAAVYTLILFIILIFSAVFLYLNHYIIELKKTKLALQVAVNKAEEANLAKSMFLATMSHEIRTPMNG VIGMTQLLISDNKDPSIQTHLDTLLESGEHLMVVINEILDFSNLEQGSLVFVQEEFELSKLLVPIKNSFQPQASEKKLQL IFDTNSLPEDLILVGDKTRIRQVIYNLVGNAIKFTSDGQVKVVLKYESDKNELCIQVSDTGIGIPSHRLKGIFNAFEQAD VRTMHDFGGTGLGLSIVKKICLSMGGDITVTSELGSGSCFVAKVISPRVTTLRDQRTLSGEKDFSGKSVLIVEDNRVNQL VAQRLCQKLGFTTYIASNGIEAVKRVRECSFDVILMDHQMPQMGGIEATKLIRNEHAFQGIILGCTADVTKDTAIAFVDA GANGVITKPLQLDSLGELIARSVTLACNASRDHHVVLE
Sequences:
>Translated_598_residues MNYKYSQKFNVMEALIALAIGITLSFFFSFKTQNSLLEATESSIVAHSASLVHMRSYIHLTQREDGDHKINKLLSEIQKL TSELNTLKEASNDINVRFPQMIWVGNPLPSVVEEYVKTADKQLVFLDKMLKAKQQIVPEVSLIELERQVFSEEMDEAAEH VHERLMDNIFLTSKAAVYTLILFIILIFSAVFLYLNHYIIELKKTKLALQVAVNKAEEANLAKSMFLATMSHEIRTPMNG VIGMTQLLISDNKDPSIQTHLDTLLESGEHLMVVINEILDFSNLEQGSLVFVQEEFELSKLLVPIKNSFQPQASEKKLQL IFDTNSLPEDLILVGDKTRIRQVIYNLVGNAIKFTSDGQVKVVLKYESDKNELCIQVSDTGIGIPSHRLKGIFNAFEQAD VRTMHDFGGTGLGLSIVKKICLSMGGDITVTSELGSGSCFVAKVISPRVTTLRDQRTLSGEKDFSGKSVLIVEDNRVNQL VAQRLCQKLGFTTYIASNGIEAVKRVRECSFDVILMDHQMPQMGGIEATKLIRNEHAFQGIILGCTADVTKDTAIAFVDA GANGVITKPLQLDSLGELIARSVTLACNASRDHHVVLE >Mature_598_residues MNYKYSQKFNVMEALIALAIGITLSFFFSFKTQNSLLEATESSIVAHSASLVHMRSYIHLTQREDGDHKINKLLSEIQKL TSELNTLKEASNDINVRFPQMIWVGNPLPSVVEEYVKTADKQLVFLDKMLKAKQQIVPEVSLIELERQVFSEEMDEAAEH VHERLMDNIFLTSKAAVYTLILFIILIFSAVFLYLNHYIIELKKTKLALQVAVNKAEEANLAKSMFLATMSHEIRTPMNG VIGMTQLLISDNKDPSIQTHLDTLLESGEHLMVVINEILDFSNLEQGSLVFVQEEFELSKLLVPIKNSFQPQASEKKLQL IFDTNSLPEDLILVGDKTRIRQVIYNLVGNAIKFTSDGQVKVVLKYESDKNELCIQVSDTGIGIPSHRLKGIFNAFEQAD VRTMHDFGGTGLGLSIVKKICLSMGGDITVTSELGSGSCFVAKVISPRVTTLRDQRTLSGEKDFSGKSVLIVEDNRVNQL VAQRLCQKLGFTTYIASNGIEAVKRVRECSFDVILMDHQMPQMGGIEATKLIRNEHAFQGIILGCTADVTKDTAIAFVDA GANGVITKPLQLDSLGELIARSVTLACNASRDHHVVLE
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=368, Percent_Identity=31.7934782608696, Blast_Score=205, Evalue=8e-54, Organism=Escherichia coli, GI87081816, Length=396, Percent_Identity=32.3232323232323, Blast_Score=188, Evalue=7e-49, Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=41.5254237288136, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI1788713, Length=421, Percent_Identity=30.166270783848, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI145693157, Length=242, Percent_Identity=38.8429752066116, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI1786783, Length=243, Percent_Identity=24.2798353909465, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786912, Length=240, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=24.5454545454545, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790436, Length=271, Percent_Identity=28.0442804428044, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788393, Length=203, Percent_Identity=25.615763546798, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788549, Length=216, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1790861, Length=230, Percent_Identity=24.3478260869565, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790551, Length=208, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=26.4957264957265, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790346, Length=199, Percent_Identity=26.1306532663317, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1790300, Length=218, Percent_Identity=28.4403669724771, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=147, Percent_Identity=34.6938775510204, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322000, Length=219, Percent_Identity=23.7442922374429, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66569; Mature: 66569
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKYSQKFNVMEALIALAIGITLSFFFSFKTQNSLLEATESSIVAHSASLVHMRSYIHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE TQREDGDHKINKLLSEIQKLTSELNTLKEASNDINVRFPQMIWVGNPLPSVVEEYVKTAD ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCHHHHHHHHHHHC KQLVFLDKMLKAKQQIVPEVSLIELERQVFSEEMDEAAEHVHERLMDNIFLTSKAAVYTL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILFIILIFSAVFLYLNHYIIELKKTKLALQVAVNKAEEANLAKSMFLATMSHEIRTPMNG HHHHHHHHHHHHHHHHHHHEEEHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH VIGMTQLLISDNKDPSIQTHLDTLLESGEHLMVVINEILDFSNLEQGSLVFVQEEFELSK HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCEEEEECHHHHHH LLVPIKNSFQPQASEKKLQLIFDTNSLPEDLILVGDKTRIRQVIYNLVGNAIKFTSDGQV HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCEEECCCCCE KVVLKYESDKNELCIQVSDTGIGIPSHRLKGIFNAFEQADVRTMHDFGGTGLGLSIVKKI EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHH CLSMGGDITVTSELGSGSCFVAKVISPRVTTLRDQRTLSGEKDFSGKSVLIVEDNRVNQL HHHCCCCEEEEECCCCCCEEEEEHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH VAQRLCQKLGFTTYIASNGIEAVKRVRECSFDVILMDHQMPQMGGIEATKLIRNEHAFQG HHHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC IILGCTADVTKDTAIAFVDAGANGVITKPLQLDSLGELIARSVTLACNASRDHHVVLE EEEEEECCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEC >Mature Secondary Structure MNYKYSQKFNVMEALIALAIGITLSFFFSFKTQNSLLEATESSIVAHSASLVHMRSYIHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE TQREDGDHKINKLLSEIQKLTSELNTLKEASNDINVRFPQMIWVGNPLPSVVEEYVKTAD ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCHHHHHHHHHHHC KQLVFLDKMLKAKQQIVPEVSLIELERQVFSEEMDEAAEHVHERLMDNIFLTSKAAVYTL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ILFIILIFSAVFLYLNHYIIELKKTKLALQVAVNKAEEANLAKSMFLATMSHEIRTPMNG HHHHHHHHHHHHHHHHHHHEEEHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH VIGMTQLLISDNKDPSIQTHLDTLLESGEHLMVVINEILDFSNLEQGSLVFVQEEFELSK HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCEEEEECHHHHHH LLVPIKNSFQPQASEKKLQLIFDTNSLPEDLILVGDKTRIRQVIYNLVGNAIKFTSDGQV HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCEEECCCCCE KVVLKYESDKNELCIQVSDTGIGIPSHRLKGIFNAFEQADVRTMHDFGGTGLGLSIVKKI EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHH CLSMGGDITVTSELGSGSCFVAKVISPRVTTLRDQRTLSGEKDFSGKSVLIVEDNRVNQL HHHCCCCEEEEECCCCCCEEEEEHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH VAQRLCQKLGFTTYIASNGIEAVKRVRECSFDVILMDHQMPQMGGIEATKLIRNEHAFQG HHHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC IILGCTADVTKDTAIAFVDAGANGVITKPLQLDSLGELIARSVTLACNASRDHHVVLE EEEEEECCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA