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The map label for this gene is uspB

Identifier: 37678260

GI number: 37678260

Start: 87825

End: 88148

Strand: Direct

Name: uspB

Synonym: VV0076

Alternate gene names: 37678260

Gene position: 87825-88148 (Clockwise)

Preceding gene: 37678259

Following gene: 37678261

Centisome position: 2.62

GC content: 44.14

Gene sequence:

>324_bases
ATGATCAATGGAGATATTATCCTGTTTGCGCTTATGGTGGTAACGGGGGTTAACCTCGCTCGTTATCTTACCGCTCTTCG
TTCACTGATTTATATCATGCGTGAAGCGCATCCACTGTTATATCAACAAGTGGATGGTAACGGATTTTTTACCACTCACG
GCAATGTCACCAAACAGGTGCGACTCTACCACTATCTGAAAAGCAAAGAGTACCACCATCATCACGATGAAGTTTTTACT
GGGAAATGCGATCGGGTAAGAGAGTTATTCGTCCTGAGTGTAAGCTTGACCGGTGTGACTTTGTTGGCTGCATTTCTTCT
GTAG

Upstream 100 bases:

>100_bases
CTCCAGCTGCTTAACGGAACAGCCAGTTTCCGCTAGCGGGTTAGAAAGACGTTGGTCGTCTTTTTCTCTTGAGCATTGAT
GAAGATGTAGGGAGGAAAAG

Downstream 100 bases:

>100_bases
CCAGTGCTTGGAAAATAACCCCCTTTGCCGTTAGAATAGCGGCGAAAAAGTAAGGATGTGCCAACTGCACATCCTTTTTT
ATTGTCAGAGAGATTTTCCA

Product: universal stress protein UspB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQVRLYHYLKSKEYHHHHDEVFT
GKCDRVRELFVLSVSLTGVTLLAAFLL

Sequences:

>Translated_107_residues
MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQVRLYHYLKSKEYHHHHDEVFT
GKCDRVRELFVLSVSLTGVTLLAAFLL
>Mature_107_residues
MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQVRLYHYLKSKEYHHHHDEVFT
GKCDRVRELFVLSVSLTGVTLLAAFLL

Specific function: Not Known. Overexpression Of Uspb Causes Cell Death In Stationary Phase, Whereas Mutants Of Uspb Are Sensitive To Exposure To Ethanol But Not Heat In Stationary Phase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein B family

Homologues:

Organism=Escherichia coli, GI1789908, Length=103, Percent_Identity=46.6019417475728, Blast_Score=109, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): USPB_VIBVU (Q8DD90)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760066.1
- GeneID:   1178048
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_1117
- HOGENOM:   HBG303496
- OMA:   CERVRGQ
- ProtClustDB:   PRK04960
- BioCyc:   VVUL216895:VV1_1117-MONOMER
- HAMAP:   MF_01088
- InterPro:   IPR019598

Pfam domain/function: PF10625 UspB

EC number: NA

Molecular weight: Translated: 12265; Mature: 12265

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1389ef18)-; HASH(0x15dacc14)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQV
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHEEECCCEEEEECCCCHHHH
RLYHYLKSKEYHHHHDEVFTGKCDRVRELFVLSVSLTGVTLLAAFLL
HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQV
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHEEECCCEEEEECCCCHHHH
RLYHYLKSKEYHHHHDEVFTGKCDRVRELFVLSVSLTGVTLLAAFLL
HHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA