Click here to switch to the map view.

The map label for this gene is ycf34

Identifier: 37523963

GI number: 37523963

Start: 4623048

End: 4623290

Strand: Reverse

Name: ycf34

Synonym: gvip569

Alternate gene names: NA

Gene position: 4623290-4623048 (Counterclockwise)

Preceding gene: 37523964

Following gene: 37523962

Centisome position: 99.23

GC content: 59.26

Gene sequence:

>243_bases
ATGTGCATCTGCATCAATTGCGCGCTCGTGGATCGTTGCCAGACCTATCACCAGGTCGAGACCATCCACCAGCAGCCGCA
CCTGACGGAGGAACCTTCCTTCGAGCCGATTCATCCGGTCATCAACGTCAACATCTACGATTACGGCCAGGGCATGGAGT
GGGACGTGGTCGGCTGTGAAAGCTTCGTGAGCGATCCCGGCCGCTGGTCGCGTCTGCGCCCCGGTGAATTGATTCCCACC
TGA

Upstream 100 bases:

>100_bases
CTCGGAAGGTTGATCCGGATCGGTCGCCTGCGGCTTGGGATGCTAGCCTTGAGGCGATGGGAGGCTTGTCGCCCTCCCGT
GCTCTCCACAGGATCCGCCT

Downstream 100 bases:

>100_bases
CGGTGCCCATGGAAACCGGCTTCACCTCCCCGGGACCGCTTATCGTTCAGATTGGCGGCTTTGCGGTCCGCTGGTACAGC
TTGCTCATTCTCGCGGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MCICINCALVDRCQTYHQVETIHQQPHLTEEPSFEPIHPVINVNIYDYGQGMEWDVVGCESFVSDPGRWSRLRPGELIPT

Sequences:

>Translated_80_residues
MCICINCALVDRCQTYHQVETIHQQPHLTEEPSFEPIHPVINVNIYDYGQGMEWDVVGCESFVSDPGRWSRLRPGELIPT
>Mature_80_residues
MCICINCALVDRCQTYHQVETIHQQPHLTEEPSFEPIHPVINVNIYDYGQGMEWDVVGCESFVSDPGRWSRLRPGELIPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9201; Mature: 9201

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCICINCALVDRCQTYHQVETIHQQPHLTEEPSFEPIHPVINVNIYDYGQGMEWDVVGCE
CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCH
SFVSDPGRWSRLRPGELIPT
HHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCICINCALVDRCQTYHQVETIHQQPHLTEEPSFEPIHPVINVNIYDYGQGMEWDVVGCE
CEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCH
SFVSDPGRWSRLRPGELIPT
HHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA