| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is wcaC [H]
Identifier: 37523869
GI number: 37523869
Start: 4524868
End: 4526631
Strand: Reverse
Name: wcaC [H]
Synonym: gll4300
Alternate gene names: 37523869
Gene position: 4526631-4524868 (Counterclockwise)
Preceding gene: 37523870
Following gene: 37523868
Centisome position: 97.16
GC content: 61.05
Gene sequence:
>1764_bases ATGGTTGCGGCTCAAGAAACTTTTGAGACCGACATGGCAAACACCCCCCCGCAGATAATCGCGGGCGACACCCTGCGCGT CGCGTCGCTGAGCACCTGGGATCTCCAGGGAGGAGCCGCCCGGGCCGCCTACCGGCTGCATCGGGGATTGCTGCAGCTGG GCCAGGATGCGACGCTCCACGTCCGCATTCGCCACTCCGACGACCCGAGCACGCGGGCTGTCTTGCCGATAGAAGCTTCT GCGCAACTGGAGACGCTCGACGATTTGGCCCGGGTGCAGGCGTACTACATCGATCACAACCGGACGGATCTGTCCAATAC GATCTTTACGCTGCCCTATCCCGCCGTCGATCTCAGCAGCGTGGCCGCAATAACCTCCGCCGATATCCTGCACCTGCACT GGGTGGCTCGCTGGCAGTCGCCTGTGACCCTGAGCAAGCTTGTCGAAGCACACCGCAAGCCGGTGTTCTGGACTCTCCAC GACATGTGGGCTTTCACCGGCGGCTGTCATTTCTCGGCAGGGTGCGAGGGCTATCGCGAGTATTGCCGCAACTGCCCGCA ACTGCAGGACGATCCTTACCAGTTGCCGGCCATGCTGCTGCAGGACAAAATCGACTTTTTAGACGGCAAAAATTTTGTCG TGGTCGCCCCCAGCCGGTGGCTGGCCGATTGTGCAAGAGCAAGTACATTTTTTGCCCACAGCCGTATCGAGGTCATCCCC TACGCCCTCGATACGGCTATCTTCGCTCCCGTCGCCAAGCCGGAGGCAAAACTCGCCCTCGGCCTGGAGGCGCACTCTCA AGTGATTCTCTTTGGCGCCCACAACTGCACCGAGCGCCGCAAGGGTTTCTCCGAGATGATCGCCGCTTTGCGTCTATTTT TGAAGCAGCCGCAATTCCACGAACGCATCAAAAACCAGACCCTTCGGCTTTGGTGTTTTGGCTACATCGGCTCTTTGGAT CTGGCGGATCTGCCGGTGGTGCACCTGGGCGAAATCCGCTCCGACGAGGAACTGCGGCGCATTTATGCTGCCGCCGACTT GTTCTGTTTGCCGTCGCTGGAAGATAACCTGCCAAACACGCTGCTAGAAGCGATGGCCTGCGCCACGGCAGTGATTGCCT TTGCTGCGGGAGGCACCCTCGACGTGCTGCAAGATCGCGTGCACGGTCGGTTGGTGCCGGTGGGCGATGTGCAGGCCCTG GCCAGGACGATCGGCGAGTGCCTGCAAGATCCCCAACTGGCCGAGTACGGCCGGCAGGGCCGCCGACTGATCGAGGCGCA CTACGCGGGGACGACGGAGGCGGCCCGGTATCTGGAGCTGTACCGCGACGTGCTCTTGGATCAGCCGCGGTCGGTTTTAC AGACCGCTACAGCCGCGCGGGATGCAGCAATCCAGGCGGCGGTGGAGACAACCAGCGGCCCGACTTTTGCCGCGATGGCC AAGCAGGTGCAGTCCGCATGCCTGAGGCTGGAGGTGCAGGATCTGCGCTCGCAGCTCGAGAAGACCCGGCAGCAACTGCA TGAGACCTGGCAGGAACTAGAGGCGACCCGGAAGGATTACTGGGACTCGCAAGGTCTGCTGTGGCAGACGCGGGGAGAGC TCGACCGGAGCCACTATGCCCGGCAGGCGTTGCAACAACAAATCGCAGGCATGGAAAGCAGTAAATTCTGGCAGCTGCGC AACTCCTGGTTTGAGCTGAAAAATAAGTTGGGGATAGACACCGATATGTCTCCAGGCATTGAGGAGCAAAAGAAAGAACC GTGA
Upstream 100 bases:
>100_bases TCTACGCCGACTTGAAGCAGCAGTCCCAGGTCGAACGCGAAGGACTGCAGACAGAAATTGCCGCCATGGAAAGCAGCAAG TTCTGGAAGCTGCGCGGGCA
Downstream 100 bases:
>100_bases GACGCCCTGGGCTGCCCGGCCGCTGAGCGACATCGGCAGATGGGGCACCCGGTGCGCCATGGCTTGCCGATGGACGCAGG TGATAAAGTGTTACCGCCCA
Product: glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MVAAQETFETDMANTPPQIIAGDTLRVASLSTWDLQGGAARAAYRLHRGLLQLGQDATLHVRIRHSDDPSTRAVLPIEAS AQLETLDDLARVQAYYIDHNRTDLSNTIFTLPYPAVDLSSVAAITSADILHLHWVARWQSPVTLSKLVEAHRKPVFWTLH DMWAFTGGCHFSAGCEGYREYCRNCPQLQDDPYQLPAMLLQDKIDFLDGKNFVVVAPSRWLADCARASTFFAHSRIEVIP YALDTAIFAPVAKPEAKLALGLEAHSQVILFGAHNCTERRKGFSEMIAALRLFLKQPQFHERIKNQTLRLWCFGYIGSLD LADLPVVHLGEIRSDEELRRIYAAADLFCLPSLEDNLPNTLLEAMACATAVIAFAAGGTLDVLQDRVHGRLVPVGDVQAL ARTIGECLQDPQLAEYGRQGRRLIEAHYAGTTEAARYLELYRDVLLDQPRSVLQTATAARDAAIQAAVETTSGPTFAAMA KQVQSACLRLEVQDLRSQLEKTRQQLHETWQELEATRKDYWDSQGLLWQTRGELDRSHYARQALQQQIAGMESSKFWQLR NSWFELKNKLGIDTDMSPGIEEQKKEP
Sequences:
>Translated_587_residues MVAAQETFETDMANTPPQIIAGDTLRVASLSTWDLQGGAARAAYRLHRGLLQLGQDATLHVRIRHSDDPSTRAVLPIEAS AQLETLDDLARVQAYYIDHNRTDLSNTIFTLPYPAVDLSSVAAITSADILHLHWVARWQSPVTLSKLVEAHRKPVFWTLH DMWAFTGGCHFSAGCEGYREYCRNCPQLQDDPYQLPAMLLQDKIDFLDGKNFVVVAPSRWLADCARASTFFAHSRIEVIP YALDTAIFAPVAKPEAKLALGLEAHSQVILFGAHNCTERRKGFSEMIAALRLFLKQPQFHERIKNQTLRLWCFGYIGSLD LADLPVVHLGEIRSDEELRRIYAAADLFCLPSLEDNLPNTLLEAMACATAVIAFAAGGTLDVLQDRVHGRLVPVGDVQAL ARTIGECLQDPQLAEYGRQGRRLIEAHYAGTTEAARYLELYRDVLLDQPRSVLQTATAARDAAIQAAVETTSGPTFAAMA KQVQSACLRLEVQDLRSQLEKTRQQLHETWQELEATRKDYWDSQGLLWQTRGELDRSHYARQALQQQIAGMESSKFWQLR NSWFELKNKLGIDTDMSPGIEEQKKEP >Mature_587_residues MVAAQETFETDMANTPPQIIAGDTLRVASLSTWDLQGGAARAAYRLHRGLLQLGQDATLHVRIRHSDDPSTRAVLPIEAS AQLETLDDLARVQAYYIDHNRTDLSNTIFTLPYPAVDLSSVAAITSADILHLHWVARWQSPVTLSKLVEAHRKPVFWTLH DMWAFTGGCHFSAGCEGYREYCRNCPQLQDDPYQLPAMLLQDKIDFLDGKNFVVVAPSRWLADCARASTFFAHSRIEVIP YALDTAIFAPVAKPEAKLALGLEAHSQVILFGAHNCTERRKGFSEMIAALRLFLKQPQFHERIKNQTLRLWCFGYIGSLD LADLPVVHLGEIRSDEELRRIYAAADLFCLPSLEDNLPNTLLEAMACATAVIAFAAGGTLDVLQDRVHGRLVPVGDVQAL ARTIGECLQDPQLAEYGRQGRRLIEAHYAGTTEAARYLELYRDVLLDQPRSVLQTATAARDAAIQAAVETTSGPTFAAMA KQVQSACLRLEVQDLRSQLEKTRQQLHETWQELEATRKDYWDSQGLLWQTRGELDRSHYARQALQQQIAGMESSKFWQLR NSWFELKNKLGIDTDMSPGIEEQKKEP
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788370, Length=437, Percent_Identity=24.0274599542334, Blast_Score=86, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 65833; Mature: 65833
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAQETFETDMANTPPQIIAGDTLRVASLSTWDLQGGAARAAYRLHRGLLQLGQDATLH CCCCHHHHHHCCCCCCCCEEECCCEEEEECEEECCCCCHHHHHHHHHHHHHHHCCCCEEE VRIRHSDDPSTRAVLPIEASAQLETLDDLARVQAYYIDHNRTDLSNTIFTLPYPAVDLSS EEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHH VAAITSADILHLHWVARWQSPVTLSKLVEAHRKPVFWTLHDMWAFTGGCHFSAGCEGYRE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCHHHHH YCRNCPQLQDDPYQLPAMLLQDKIDFLDGKNFVVVAPSRWLADCARASTFFAHSRIEVIP HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHEEH YALDTAIFAPVAKPEAKLALGLEAHSQVILFGAHNCTERRKGFSEMIAALRLFLKQPQFH HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH ERIKNQTLRLWCFGYIGSLDLADLPVVHLGEIRSDEELRRIYAAADLFCLPSLEDNLPNT HHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH LLEAMACATAVIAFAAGGTLDVLQDRVHGRLVPVGDVQALARTIGECLQDPQLAEYGRQG HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH RRLIEAHYAGTTEAARYLELYRDVLLDQPRSVLQTATAARDAAIQAAVETTSGPTFAAMA HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KQVQSACLRLEVQDLRSQLEKTRQQLHETWQELEATRKDYWDSQGLLWQTRGELDRSHYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH RQALQQQIAGMESSKFWQLRNSWFELKNKLGIDTDMSPGIEEQKKEP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC >Mature Secondary Structure MVAAQETFETDMANTPPQIIAGDTLRVASLSTWDLQGGAARAAYRLHRGLLQLGQDATLH CCCCHHHHHHCCCCCCCCEEECCCEEEEECEEECCCCCHHHHHHHHHHHHHHHCCCCEEE VRIRHSDDPSTRAVLPIEASAQLETLDDLARVQAYYIDHNRTDLSNTIFTLPYPAVDLSS EEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHH VAAITSADILHLHWVARWQSPVTLSKLVEAHRKPVFWTLHDMWAFTGGCHFSAGCEGYRE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCHHHHH YCRNCPQLQDDPYQLPAMLLQDKIDFLDGKNFVVVAPSRWLADCARASTFFAHSRIEVIP HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHEEH YALDTAIFAPVAKPEAKLALGLEAHSQVILFGAHNCTERRKGFSEMIAALRLFLKQPQFH HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHCCCHHH ERIKNQTLRLWCFGYIGSLDLADLPVVHLGEIRSDEELRRIYAAADLFCLPSLEDNLPNT HHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH LLEAMACATAVIAFAAGGTLDVLQDRVHGRLVPVGDVQALARTIGECLQDPQLAEYGRQG HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH RRLIEAHYAGTTEAARYLELYRDVLLDQPRSVLQTATAARDAAIQAAVETTSGPTFAAMA HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KQVQSACLRLEVQDLRSQLEKTRQQLHETWQELEATRKDYWDSQGLLWQTRGELDRSHYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH RQALQQQIAGMESSKFWQLRNSWFELKNKLGIDTDMSPGIEEQKKEP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759852; 9278503 [H]