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The map label for this gene is yjfH [C]

Identifier: 37523750

GI number: 37523750

Start: 4379124

End: 4380140

Strand: Direct

Name: yjfH [C]

Synonym: glr4181

Alternate gene names: 37523750

Gene position: 4379124-4380140 (Clockwise)

Preceding gene: 37523749

Following gene: 37523751

Centisome position: 93.99

GC content: 66.86

Gene sequence:

>1017_bases
ATGGCCCCGACACCCCGTCCCCAGAGGCCTAAGCGCCCGAGCACCAAGGCGAAGCCCTACTCCGCCGCCAAACCCAAAAC
CAAGCGCCCGGCCAAACTGGTGCGTAAAGCCACAGGCGAGGTGTCCCGACCCGAACGGCCGCGCGATGCGACCCGAACGG
CCAAAGTCAAAGACATCACGCCGACCGGGGCCGGGAGCCGCGCCCCCAAGACCATCAAGACCCGCATGGCCCCTGAAGCC
GCCCCGACCGTAGTCGAGAGCGACGAGGCGGAACTGCTCTACGGCAAACAGTCGGTGCTCGCTGCTCTGCAGAACAGCCG
TCCCCTCAACCGCGTCTGGCTCACCGAGAAGTTGCGCTACGACCCACGCTTTTTGCGGCTGCTCGACGCGGCCAAGGCCG
GCGGGGCGGTGATCGACATCGTCGAGCCGCGCCGGCTCGATCAGCTCACCGCCGGGGGCAACCACCAGGGCGTCGCCGCC
CAGGCCGCCGCCCATCCCTACGTCGAATTCGAGGAATTGATCGCTTCGCTCGTGGAGCGGCCCGACCCGGTGTTGCTCGC
CGCCGACGGCATCGAAGATCCCCACAATCTGGGGGCGCTCATCCGCTCCGCCGAGGCGTTCGGTTTTCAGGGGATCATCT
TGCCCCAGCGGCGGGCGGTGGGGGTGACGGCGACGGTGGCCAAGGTGGCGGCGGGGGCGGTGGAGCACCTGCCCATCGCC
CGGGTCACCAACCTCAACCAGGCCATCGAACGCCTCAAGGAGGCGGGTTATCAGGTCGTCGGCACCCAGGAGAAGGCAAG
CCAGGCGCTCTACGAACTGAAGTTGGATGGGCCATTGGTAGTCGTGGTGGGCTCCGAAGGCAAGGGCATTTCGCTACTCA
CCCAGCGCCACTGCGATCACATGGTCTCGATTCCGCTGGCGGGCAAGACTACCAGCCTCAACGCTTCGGTGGCAGGTGGG
ATCATGCTTTACGAGGTGATGCGCCAGCGCCGCGCCAACCAGATCGACCTCAGCTAG

Upstream 100 bases:

>100_bases
TTGGCCACGGCCTTCGAGGCTTTGTTAGGATATTTGTTTCTGGCTGACCGCGACCGCCTCGGGGTCATCCTTCACCTGTG
CGATGAGTTTCAACACCACC

Downstream 100 bases:

>100_bases
ACGGTGCACCCTGTACCCGGCCACTGCGAGAGAAGCATGGGCGGGTTTAGGCTAGAAGGCGGACGGCTTCCCCGGTCCTA
TGCAATCCTGGCTGCAGAAT

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MAPTPRPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDITPTGAGSRAPKTIKTRMAPEA
APTVVESDEAELLYGKQSVLAALQNSRPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAA
QAAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIA
RVTNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGG
IMLYEVMRQRRANQIDLS

Sequences:

>Translated_338_residues
MAPTPRPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDITPTGAGSRAPKTIKTRMAPEA
APTVVESDEAELLYGKQSVLAALQNSRPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAA
QAAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIA
RVTNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGG
IMLYEVMRQRRANQIDLS
>Mature_337_residues
APTPRPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDITPTGAGSRAPKTIKTRMAPEAA
PTVVESDEAELLYGKQSVLAALQNSRPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAAQ
AAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIAR
VTNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGGI
MLYEVMRQRRANQIDLS

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI40068479, Length=282, Percent_Identity=30.1418439716312, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1790623, Length=244, Percent_Identity=42.2131147540984, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788935, Length=255, Percent_Identity=27.4509803921569, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1790083, Length=162, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17555908, Length=285, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6324775, Length=294, Percent_Identity=27.891156462585, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004441
- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 36385; Mature: 36254

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTPRPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDIT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCEEEECC
PTGAGSRAPKTIKTRMAPEAAPTVVESDEAELLYGKQSVLAALQNSRPLNRVWLTEKLRY
CCCCCCCCCHHHHHHCCCCCCCCEECCCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHCC
DPRFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAAQAAAHPYVEFEELIASLVER
CHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCC
PDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIA
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
RVTNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDH
HHHHHHHHHHHHHHCCCEEECCHHHHHHHHEEEECCCCEEEEECCCCCCCHHHHHHHCCC
MVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQIDLS
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
APTPRPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDIT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCEEEECC
PTGAGSRAPKTIKTRMAPEAAPTVVESDEAELLYGKQSVLAALQNSRPLNRVWLTEKLRY
CCCCCCCCCHHHHHHCCCCCCCCEECCCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHCC
DPRFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAAQAAAHPYVEFEELIASLVER
CHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCC
PDPVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIA
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHH
RVTNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDH
HHHHHHHHHHHHHHCCCEEECCHHHHHHHHEEEECCCCEEEEECCCCCCCHHHHHHHCCC
MVSIPLAGKTTSLNASVAGGIMLYEVMRQRRANQIDLS
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]