| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523745
Identifier: 37523745
GI number: 37523745
Start: 4374977
End: 4376005
Strand: Reverse
Name: 37523745
Synonym: gll4176
Alternate gene names: NA
Gene position: 4376005-4374977 (Counterclockwise)
Preceding gene: 37523755
Following gene: 37523744
Centisome position: 93.93
GC content: 60.84
Gene sequence:
>1029_bases ATGGCCGAGATTCGCGACCGCTTCGCAGGCACTGTGTCCGGCAAAATTTATCTTTGGTTGGCCGTCTTCATCTTTGGTCT GGCCAATCCGGTGGTCCGCAAATTGACCGAACTGGGCACCCAGTATCCGGTGGAGGGCCGCAATCCGATTTCGCTGTGCA ACGTTCTGTTTGTCGGCAATCTATGTGCGCTGCCGGTGCTGTTTGCTGTCTACCGCAGCGACTGGACGCCGGGCAATCTG GGACGCTTGAGCCGCCGGGAATTGTCACTGCTGCTCATCGTTGCTCTGCTTGCCGGTGCCCTCGCACCCGCCTTGATCTT CCAGGCGCTTTCGCTGGCGATGGTCAGCAGTGTGCTGTTCGTCAGCCGTATCGAGACACCGCTGCTATTGGCGCTGTCGG TGTGGCTGTACGGCGAGCGCCTTAACCGCTACCAGAGCATCGGGGCGCTGATGTGCTTTGTAGGCGCGTTGGTACCGCTG CTGCTGCCCTCCGGCGGTGTCCCGACTTTCTCGATGGCCGAAGATCTGTGGAGCTTCGGGATGGGAGAAGGGTTCGCAGC CCTGGCCGCCGTCGCCTCCGCCGTCGCCACCATCCTCAGCAAAAACAGCCTCGCCGCGGTACCCCCCGGCATTTATCTGG TCGTGCGCTCAGCTTTGGGAGCGGTGATTTTCTTTTTCGTCGCCCTGGTTCTGTATGGACCGGAACACTTTCAGGACGCT TTCTCGCCGGTCCTGTGGCAGTGGATGCTCCTGTACGGAGCCGTCATCGTCGCCCTCGGGCAGTTGCTCTGGTTTTCCGG CCTCAAGCGCGCCGCCATCCTCGATGCTTCTTTGATCAGTTCATTCATTCCGGCCATTGGTACTGTGGGAGCCTACTTTC TGCTGGGCGAAGTGCCGGACGGCATCCAGTACTTCAGCGGTACCCTGGTGATCGCCGGTTTGCTGCTCAGCCAGTGGGGT TCGCGGCAACCCCAGGCGGCTTCGAGCCCCGAGATGCTGGAACCCATCGGCGGCTTTAAAGGCATGTGA
Upstream 100 bases:
>100_bases CTGAGCCCTGGCCGGCGGTCGGGGCTTTGTACAATCCACCGGGCTGCACTGCCCGTAATCCCTGCAGAACCCGCACGCAA TGCCCACCTATAGTTGAGCC
Downstream 100 bases:
>100_bases GCGCTCCGACAGCAACCGGCGGGGGTGATAGAATCGCTTCGCTTGCGGCGGCCGGGGGATCAGCCCGGCCTGAATGGGGA AAGCGTGGTGAGAATCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAEIRDRFAGTVSGKIYLWLAVFIFGLANPVVRKLTELGTQYPVEGRNPISLCNVLFVGNLCALPVLFAVYRSDWTPGNL GRLSRRELSLLLIVALLAGALAPALIFQALSLAMVSSVLFVSRIETPLLLALSVWLYGERLNRYQSIGALMCFVGALVPL LLPSGGVPTFSMAEDLWSFGMGEGFAALAAVASAVATILSKNSLAAVPPGIYLVVRSALGAVIFFFVALVLYGPEHFQDA FSPVLWQWMLLYGAVIVALGQLLWFSGLKRAAILDASLISSFIPAIGTVGAYFLLGEVPDGIQYFSGTLVIAGLLLSQWG SRQPQAASSPEMLEPIGGFKGM
Sequences:
>Translated_342_residues MAEIRDRFAGTVSGKIYLWLAVFIFGLANPVVRKLTELGTQYPVEGRNPISLCNVLFVGNLCALPVLFAVYRSDWTPGNL GRLSRRELSLLLIVALLAGALAPALIFQALSLAMVSSVLFVSRIETPLLLALSVWLYGERLNRYQSIGALMCFVGALVPL LLPSGGVPTFSMAEDLWSFGMGEGFAALAAVASAVATILSKNSLAAVPPGIYLVVRSALGAVIFFFVALVLYGPEHFQDA FSPVLWQWMLLYGAVIVALGQLLWFSGLKRAAILDASLISSFIPAIGTVGAYFLLGEVPDGIQYFSGTLVIAGLLLSQWG SRQPQAASSPEMLEPIGGFKGM >Mature_341_residues AEIRDRFAGTVSGKIYLWLAVFIFGLANPVVRKLTELGTQYPVEGRNPISLCNVLFVGNLCALPVLFAVYRSDWTPGNLG RLSRRELSLLLIVALLAGALAPALIFQALSLAMVSSVLFVSRIETPLLLALSVWLYGERLNRYQSIGALMCFVGALVPLL LPSGGVPTFSMAEDLWSFGMGEGFAALAAVASAVATILSKNSLAAVPPGIYLVVRSALGAVIFFFVALVLYGPEHFQDAF SPVLWQWMLLYGAVIVALGQLLWFSGLKRAAILDASLISSFIPAIGTVGAYFLLGEVPDGIQYFSGTLVIAGLLLSQWGS RQPQAASSPEMLEPIGGFKGM
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 36580; Mature: 36449
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIRDRFAGTVSGKIYLWLAVFIFGLANPVVRKLTELGTQYPVEGRNPISLCNVLFVGN CCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LCALPVLFAVYRSDWTPGNLGRLSRRELSLLLIVALLAGALAPALIFQALSLAMVSSVLF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRIETPLLLALSVWLYGERLNRYQSIGALMCFVGALVPLLLPSGGVPTFSMAEDLWSFG HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC MGEGFAALAAVASAVATILSKNSLAAVPPGIYLVVRSALGAVIFFFVALVLYGPEHFQDA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FSPVLWQWMLLYGAVIVALGQLLWFSGLKRAAILDASLISSFIPAIGTVGAYFLLGEVPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GIQYFSGTLVIAGLLLSQWGSRQPQAASSPEMLEPIGGFKGM HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure AEIRDRFAGTVSGKIYLWLAVFIFGLANPVVRKLTELGTQYPVEGRNPISLCNVLFVGN CHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LCALPVLFAVYRSDWTPGNLGRLSRRELSLLLIVALLAGALAPALIFQALSLAMVSSVLF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRIETPLLLALSVWLYGERLNRYQSIGALMCFVGALVPLLLPSGGVPTFSMAEDLWSFG HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC MGEGFAALAAVASAVATILSKNSLAAVPPGIYLVVRSALGAVIFFFVALVLYGPEHFQDA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FSPVLWQWMLLYGAVIVALGQLLWFSGLKRAAILDASLISSFIPAIGTVGAYFLLGEVPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GIQYFSGTLVIAGLLLSQWGSRQPQAASSPEMLEPIGGFKGM HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]