| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523720
Identifier: 37523720
GI number: 37523720
Start: 4351235
End: 4352824
Strand: Direct
Name: 37523720
Synonym: glr4151
Alternate gene names: NA
Gene position: 4351235-4352824 (Clockwise)
Preceding gene: 37523719
Following gene: 37523722
Centisome position: 93.39
GC content: 60.88
Gene sequence:
>1590_bases ATGCCCCTGGGTTATCTGGCACTTGTTCTGCACGCCCATCTGCCCTTCGTGCGCCATCCGGAAAGCGACTACGTCCTGGA GGAAGAGTGGCTTTACGAAGCCATCACCGAGACGTACATTCCGCTTATCAACATGTTCGAGGGCCTGCGCGCCGACGGCA TCGACTTCAAGCTCACCATGTCGATGACGCCGCCCCTGGTCTCGATGTTGCGCGATCCGTACCTGCAGGAAAAATTCGAG CTGCACCTGACACAGCTGGAGCAGCTGACCCAAAAGGAACTGGAGCGCACCAAAACCCACGGGCACCTCAACTACCTGGC CCACCACTACGAAGAATTTTTTGCCGCCGCCCGCTCCACCTGGGCGCGCTACGACGGCGATCTGGTGAGTGCCTTCAAGC CGTTCCAAGATTCGGGCAATCTCGAAATTATTACCTGCGGCGCCACCCACGGCTATTTGCCCTTGATGCAGATGTACCCG CAGGCGGTCTGGGCGCAACTGAAGACGGCTTTCGATCACTATTGCGAAAGCTTTGGCTGCGAACCGAAGGGGATCTGGCT GCCGGAGTGCGCCTATTACACCGGGCTTGAGCGGATGCTGGCCGATGTCGGTTTGCGCTATTTTCTCACCGACGCCCACG GTCTGCTCTACGCCAAGCCCCGGCCGCGCTACGGCGCCTATGCTCCCATCTTTACCACCACCGGCGTGGCCGCCTTCGGC CGCGACTACGAATCGTCCCAGCAAGTCTGGAGTTCGGAGGTGGGTTACCCGGGCGACCCGTCCTACCGCGAATTTTACAA AGACCTGGGCTACGAGGCCGAATACGAGTACATCAAGCCCTACATCCAGCCCAACGGCACCCGCAAGAACGTCGGCATCA AATACCACAAGATCACCAGCCGCCAGGGCGACATGGGCGGCAAAGAACTTTACGACCCCTACTGGGCGCGCGAAAAAGCC GCCGAGCACGCGAACAACTTCATGTTCAACCGCGGCCAGCAAATCGAGTACCTGCACGGGGTGATGGGCCGCCCGCCCAT CGTCGTCTCCCCCTACGACGCCGAGCTCTTTGGTCACTGGTGGTACGAGGGGCCGTGGTTTTTGAACTATTTGTTCCGCA AGTCCTACTACGACCAGAACACCTACCAGATGACCCACCTGGCCGATTACCTGCGCGCCAATCCGACCCAGCAGGTCTGC CATCCGGCCCAGTCGAGCTGGGGAGCCAAGGGTTTTCACGAGTTCTGGCTCAACGACACCAACGCCTGGGTCTACCCGCA CCTGCACAAGGCCACCGAGCGGATGATTGACCTGGCCAGACGCGAGCCGGCCGACGAACTGGAGTGGCGCGTGCTCAACC AGGCGGCCCGCGAGGTGCTGCTCGCCCAATCCTCCGACTGGGCCTTCATCATGCGCACCGGCACCATGGTCCCCTACGCC GTGCGCCGCACCCGGTCGCACCTGCTGCGTTTCAATCGTCTGTTTGAAGCGATCCACCAGGGCAAGGTCGACAGCGAGTG GCTGCAGAAAGTCGAAACGGTCGACAACATCTTCCCGAGCATGAACTACCGCACCTACCGGCCGCTCTAG
Upstream 100 bases:
>100_bases GATGAAAATCGAAGCGTACTAAGCGCTTCGCCCACCGGGGCGCGGCGAACCGCGCCCCGGCCACCCGCCGACTTTTGACT ATTTACTTCGAGGTTCCGCC
Downstream 100 bases:
>100_bases AGCGTTTTTTGTCTCCGCTTTTCCCTGTCCCGGCGCCACCCCATGCGGCGCCGGTTTTTTGCGGGCTGTTCTCAGGCGAT CGAATCCGGGTCGATTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MPLGYLALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLINMFEGLRADGIDFKLTMSMTPPLVSMLRDPYLQEKFE LHLTQLEQLTQKELERTKTHGHLNYLAHHYEEFFAAARSTWARYDGDLVSAFKPFQDSGNLEIITCGATHGYLPLMQMYP QAVWAQLKTAFDHYCESFGCEPKGIWLPECAYYTGLERMLADVGLRYFLTDAHGLLYAKPRPRYGAYAPIFTTTGVAAFG RDYESSQQVWSSEVGYPGDPSYREFYKDLGYEAEYEYIKPYIQPNGTRKNVGIKYHKITSRQGDMGGKELYDPYWAREKA AEHANNFMFNRGQQIEYLHGVMGRPPIVVSPYDAELFGHWWYEGPWFLNYLFRKSYYDQNTYQMTHLADYLRANPTQQVC HPAQSSWGAKGFHEFWLNDTNAWVYPHLHKATERMIDLARREPADELEWRVLNQAAREVLLAQSSDWAFIMRTGTMVPYA VRRTRSHLLRFNRLFEAIHQGKVDSEWLQKVETVDNIFPSMNYRTYRPL
Sequences:
>Translated_529_residues MPLGYLALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLINMFEGLRADGIDFKLTMSMTPPLVSMLRDPYLQEKFE LHLTQLEQLTQKELERTKTHGHLNYLAHHYEEFFAAARSTWARYDGDLVSAFKPFQDSGNLEIITCGATHGYLPLMQMYP QAVWAQLKTAFDHYCESFGCEPKGIWLPECAYYTGLERMLADVGLRYFLTDAHGLLYAKPRPRYGAYAPIFTTTGVAAFG RDYESSQQVWSSEVGYPGDPSYREFYKDLGYEAEYEYIKPYIQPNGTRKNVGIKYHKITSRQGDMGGKELYDPYWAREKA AEHANNFMFNRGQQIEYLHGVMGRPPIVVSPYDAELFGHWWYEGPWFLNYLFRKSYYDQNTYQMTHLADYLRANPTQQVC HPAQSSWGAKGFHEFWLNDTNAWVYPHLHKATERMIDLARREPADELEWRVLNQAAREVLLAQSSDWAFIMRTGTMVPYA VRRTRSHLLRFNRLFEAIHQGKVDSEWLQKVETVDNIFPSMNYRTYRPL >Mature_528_residues PLGYLALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLINMFEGLRADGIDFKLTMSMTPPLVSMLRDPYLQEKFEL HLTQLEQLTQKELERTKTHGHLNYLAHHYEEFFAAARSTWARYDGDLVSAFKPFQDSGNLEIITCGATHGYLPLMQMYPQ AVWAQLKTAFDHYCESFGCEPKGIWLPECAYYTGLERMLADVGLRYFLTDAHGLLYAKPRPRYGAYAPIFTTTGVAAFGR DYESSQQVWSSEVGYPGDPSYREFYKDLGYEAEYEYIKPYIQPNGTRKNVGIKYHKITSRQGDMGGKELYDPYWAREKAA EHANNFMFNRGQQIEYLHGVMGRPPIVVSPYDAELFGHWWYEGPWFLNYLFRKSYYDQNTYQMTHLADYLRANPTQQVCH PAQSSWGAKGFHEFWLNDTNAWVYPHLHKATERMIDLARREPADELEWRVLNQAAREVLLAQSSDWAFIMRTGTMVPYAV RRTRSHLLRFNRLFEAIHQGKVDSEWLQKVETVDNIFPSMNYRTYRPL
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61953; Mature: 61822
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLGYLALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLINMFEGLRADGIDFKLTM CCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SMTPPLVSMLRDPYLQEKFELHLTQLEQLTQKELERTKTHGHLNYLAHHYEEFFAAARST CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WARYDGDLVSAFKPFQDSGNLEIITCGATHGYLPLMQMYPQAVWAQLKTAFDHYCESFGC HHHCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPKGIWLPECAYYTGLERMLADVGLRYFLTDAHGLLYAKPRPRYGAYAPIFTTTGVAAFG CCCCCCCCHHHHHHHHHHHHHHHCHHHEEECCCCEEEECCCCCCCCCCCHHHHCCHHHHC RDYESSQQVWSSEVGYPGDPSYREFYKDLGYEAEYEYIKPYIQPNGTRKNVGIKYHKITS CCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECC RQGDMGGKELYDPYWAREKAAEHANNFMFNRGQQIEYLHGVMGRPPIVVSPYDAELFGHW CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCHHHHHHH WYEGPWFLNYLFRKSYYDQNTYQMTHLADYLRANPTQQVCHPAQSSWGAKGFHEFWLNDT CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCHHHHCCCCCCHHHHHCCCC NAWVYPHLHKATERMIDLARREPADELEWRVLNQAAREVLLAQSSDWAFIMRTGTMVPYA CCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH VRRTRSHLLRFNRLFEAIHQGKVDSEWLQKVETVDNIFPSMNYRTYRPL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PLGYLALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLINMFEGLRADGIDFKLTM CHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SMTPPLVSMLRDPYLQEKFELHLTQLEQLTQKELERTKTHGHLNYLAHHYEEFFAAARST CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WARYDGDLVSAFKPFQDSGNLEIITCGATHGYLPLMQMYPQAVWAQLKTAFDHYCESFGC HHHCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPKGIWLPECAYYTGLERMLADVGLRYFLTDAHGLLYAKPRPRYGAYAPIFTTTGVAAFG CCCCCCCCHHHHHHHHHHHHHHHCHHHEEECCCCEEEECCCCCCCCCCCHHHHCCHHHHC RDYESSQQVWSSEVGYPGDPSYREFYKDLGYEAEYEYIKPYIQPNGTRKNVGIKYHKITS CCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECC RQGDMGGKELYDPYWAREKAAEHANNFMFNRGQQIEYLHGVMGRPPIVVSPYDAELFGHW CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCCHHHHHHH WYEGPWFLNYLFRKSYYDQNTYQMTHLADYLRANPTQQVCHPAQSSWGAKGFHEFWLNDT CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCHHHHCCCCCCHHHHHCCCC NAWVYPHLHKATERMIDLARREPADELEWRVLNQAAREVLLAQSSDWAFIMRTGTMVPYA CCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH VRRTRSHLLRFNRLFEAIHQGKVDSEWLQKVETVDNIFPSMNYRTYRPL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA