| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523708
Identifier: 37523708
GI number: 37523708
Start: 4337819
End: 4338949
Strand: Direct
Name: 37523708
Synonym: glr4139
Alternate gene names: NA
Gene position: 4337819-4338949 (Clockwise)
Preceding gene: 37523707
Following gene: 37523709
Centisome position: 93.11
GC content: 68.88
Gene sequence:
>1131_bases GTGGGTGCGGCGTGCCCACGTCGGCCGATCGGTGCCAGAATTTTGCCCATGGTCATTTACTGTTTTGATCCCGAGCGGGG ACGGCGGTGGACGGAGCGCCTGACGGGGATTCGTCCGCAGTTTGCCTGCGTGCTGGGTTTTACGGAGACCGCTTTGATTC CGGGCATCTCGGCGGCGGGCCTGACACCTGAGGCCCGCCGCTTTACTGCCTTGGGCGACGGCGAGGTGCTGCTGGCGGGC CGCTCGGCGCGCCTGCCCAGTGCCCCGGAAGGGTACCCTTCGCCGGTGGTGATTAGCCGCGCGGTGGTGGAACTGTTGGG ACTGCCGGTACGGGTATTCGACGCCGGACTGCCCGAGACCTGCAAAGATGCGGTCCACCTGGGCGGCTCACCGGCCCGCT GCCTGAGCACCGGCCGAGCCCTGGCACCCGATACGGTCGCTCACTTATTTTCTCAGGGTCTCGCCTGGGGCGAGCGGCTT GCGGACGAGGGCGGCTACCTGGCCATCGGCGAGTGCGTGGCCGGCGGGACGACGACGGCGCTCGCGGTGCTGCGCGCCCT GGGTCATGCCGCCGACGGGCTGGTGAGCAGTTCCCATCCCCGCTGCAACCACACCCAAAAGGGGGCGCTGGTGGACTTGG CCCTTCAAAAAGCCGATTTGCCAATCGATGCCTCTGCCCTGGCGATTCTTGCCGCCCTGGGCGACCCCGCCCAACCGGCC ATTGCCGGGATGGCAATCGCGGCGAGCCACCGGGTGCCGGTGCTGCTTGCCGGAGGGACACAGATGCTTGCGGTGGCGGC GGTGGCCGAGCGCCTCGCGGCGGAGGCGGGGCTTGGCTGGCGGCCGGAGCAGATAGCGGTGGGTACCACCCGCTGGGTGG CCGCCGATCCGACCGCCGATGCGGCGCTGTTGGCGGCGCGCATCGGGGTGGTGCCGCTTTTGGCCGCGGCGCTCGACTTT TCGCACTCCCGCCATCCGGCTTTGCAGGCTTACGAGCGCGGCTACGTCAAAGAAGGGGTAGGCGCGGGCGGTCTGGCCAT CGCCGCTGAGCTTGCCGGTATCGACTCCGAACGGCTCTTGGCAGCGATCGACGATTGGCTCGATCGCTGGAACTTGCCCA CGCCGGTTTAA
Upstream 100 bases:
>100_bases TGGTCAGCCCCAACCCTGCCCCGGTGGCTAAACCGGCCGCAAGAGGACCCTGATGTTGATCGGGTGCCCACGAGCAACTG GGGAGGGGTTGCCGTCGGAC
Downstream 100 bases:
>100_bases ACCCTAGTAGCCGGGCGGTTGTCAGGGAGCGGCAGATGCCCGAAGAAGAAGAAGAATTTCACGAAGAAGATGCATCGCCT GGGGAAATGGACGAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MGAACPRRPIGARILPMVIYCFDPERGRRWTERLTGIRPQFACVLGFTETALIPGISAAGLTPEARRFTALGDGEVLLAG RSARLPSAPEGYPSPVVISRAVVELLGLPVRVFDAGLPETCKDAVHLGGSPARCLSTGRALAPDTVAHLFSQGLAWGERL ADEGGYLAIGECVAGGTTTALAVLRALGHAADGLVSSSHPRCNHTQKGALVDLALQKADLPIDASALAILAALGDPAQPA IAGMAIAASHRVPVLLAGGTQMLAVAAVAERLAAEAGLGWRPEQIAVGTTRWVAADPTADAALLAARIGVVPLLAAALDF SHSRHPALQAYERGYVKEGVGAGGLAIAAELAGIDSERLLAAIDDWLDRWNLPTPV
Sequences:
>Translated_376_residues MGAACPRRPIGARILPMVIYCFDPERGRRWTERLTGIRPQFACVLGFTETALIPGISAAGLTPEARRFTALGDGEVLLAG RSARLPSAPEGYPSPVVISRAVVELLGLPVRVFDAGLPETCKDAVHLGGSPARCLSTGRALAPDTVAHLFSQGLAWGERL ADEGGYLAIGECVAGGTTTALAVLRALGHAADGLVSSSHPRCNHTQKGALVDLALQKADLPIDASALAILAALGDPAQPA IAGMAIAASHRVPVLLAGGTQMLAVAAVAERLAAEAGLGWRPEQIAVGTTRWVAADPTADAALLAARIGVVPLLAAALDF SHSRHPALQAYERGYVKEGVGAGGLAIAAELAGIDSERLLAAIDDWLDRWNLPTPV >Mature_375_residues GAACPRRPIGARILPMVIYCFDPERGRRWTERLTGIRPQFACVLGFTETALIPGISAAGLTPEARRFTALGDGEVLLAGR SARLPSAPEGYPSPVVISRAVVELLGLPVRVFDAGLPETCKDAVHLGGSPARCLSTGRALAPDTVAHLFSQGLAWGERLA DEGGYLAIGECVAGGTTTALAVLRALGHAADGLVSSSHPRCNHTQKGALVDLALQKADLPIDASALAILAALGDPAQPAI AGMAIAASHRVPVLLAGGTQMLAVAAVAERLAAEAGLGWRPEQIAVGTTRWVAADPTADAALLAARIGVVPLLAAALDFS HSRHPALQAYERGYVKEGVGAGGLAIAAELAGIDSERLLAAIDDWLDRWNLPTPV
Specific function: Unknown
COG id: COG2038
COG function: function code H; NaMN:DMB phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0284 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4139_GLOVI (Q7NDU3)
Other databases:
- EMBL: BA000045 - RefSeq: NP_927085.1 - ProteinModelPortal: Q7NDU3 - GeneID: 2602542 - GenomeReviews: BA000045_GR - KEGG: gvi:glr4139 - NMPDR: fig|251221.1.peg.4139 - HOGENOM: HBG497525 - OMA: QMLAVYA - ProtClustDB: PRK04447 - BioCyc: GVIO251221:GLR4139-MONOMER - HAMAP: MF_01086 - InterPro: IPR003200 - InterPro: IPR002805 - TIGRFAMs: TIGR00303
Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT
EC number: NA
Molecular weight: Translated: 38789; Mature: 38658
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAACPRRPIGARILPMVIYCFDPERGRRWTERLTGIRPQFACVLGFTETALIPGISAAG CCCCCCCCCCCHHEEEEEEEEECCHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCC LTPEARRFTALGDGEVLLAGRSARLPSAPEGYPSPVVISRAVVELLGLPVRVFDAGLPET CCCCHHEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCHH CKDAVHLGGSPARCLSTGRALAPDTVAHLFSQGLAWGERLADEGGYLAIGECVAGGTTTA HHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCHHHH LAVLRALGHAADGLVSSSHPRCNHTQKGALVDLALQKADLPIDASALAILAALGDPAQPA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH IAGMAIAASHRVPVLLAGGTQMLAVAAVAERLAAEAGLGWRPEQIAVGTTRWVAADPTAD HHHHHHEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCH AALLAARIGVVPLLAAALDFSHSRHPALQAYERGYVKEGVGAGGLAIAAELAGIDSERLL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCHHHHH AAIDDWLDRWNLPTPV HHHHHHHHHCCCCCCC >Mature Secondary Structure GAACPRRPIGARILPMVIYCFDPERGRRWTERLTGIRPQFACVLGFTETALIPGISAAG CCCCCCCCCCHHEEEEEEEEECCHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCC LTPEARRFTALGDGEVLLAGRSARLPSAPEGYPSPVVISRAVVELLGLPVRVFDAGLPET CCCCHHEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCHH CKDAVHLGGSPARCLSTGRALAPDTVAHLFSQGLAWGERLADEGGYLAIGECVAGGTTTA HHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCHHHH LAVLRALGHAADGLVSSSHPRCNHTQKGALVDLALQKADLPIDASALAILAALGDPAQPA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH IAGMAIAASHRVPVLLAGGTQMLAVAAVAERLAAEAGLGWRPEQIAVGTTRWVAADPTAD HHHHHHEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCH AALLAARIGVVPLLAAALDFSHSRHPALQAYERGYVKEGVGAGGLAIAAELAGIDSERLL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCHHHHH AAIDDWLDRWNLPTPV HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292