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The map label for this gene is xynX [H]

Identifier: 37523679

GI number: 37523679

Start: 4305570

End: 4306595

Strand: Direct

Name: xynX [H]

Synonym: glr4110

Alternate gene names: 37523679

Gene position: 4305570-4306595 (Clockwise)

Preceding gene: 37523678

Following gene: 37523681

Centisome position: 92.41

GC content: 64.33

Gene sequence:

>1026_bases
ATGGATAGAACTCCCAGGATAGAGAGTTTGGAAGGTATGAAAAATGGATGGCAAGGGACAGTAGGGCTGGTTGTCTGCGC
GACTTTGGCAACTGGAGCCCAGGCGGCGGAATTCAAGGACATCGCCGGGTACTGGGGGTCTTCCTACGTCGAAACCCTGG
CCGACCGCCGGTTTGTTGCCGGCTTCCCGGACGATACCTTTCGTCCCGATGCGCCGGTCACCCGCGCCCAGCTCGCGGCG
ATGGCCGCCCGGGCCTTCGACCTGCCTGAAAGCCAGGTGAGCAGCCTGACCTTCAAAGACGTCTCCCCCAACTACTGGGC
GGCCAAAGCGATTGCAACTGTGGCTGACCGGGGTCTGGCAAGCGGGTTTCCCGACGGTAACTTTCACCCCGAGGATCTGC
TCACCCGCGCCCAGGCGATCGTGATCTTCTCGCAGGTGCTTGGACGCTTCTCCCGGAACAACACCGAAGGCGCCCTCGCC
GGCTACACCGATGCCGAGGCGGTGCCGGACTGGGCAAAGCCGGGCATCGAAAAAGCCGCCGCCGCCTCGATCATCGTGAG
CTACCCCGACCCGAACGTCATCAAGCCCAACACGGTCGCCACCCGCGGCGAGGTGGCCGCCATGATGTACCAGACGCTGA
TTCGCCTGGGGATCAGCCTGCCGCCCCTCGATATCGGGGTAGTGGGCAGCGACGACCGGCCGACGGTGCCGCGCGAGGAG
CGGGCGGCCGCCGAACGGGTCGCGATCGAGCGCTTGGTGCTGCAGCCCGAATTGAATGTGTTCCGTTCAGGCGACGAGCT
GTCGGTGCGCGCCTTTGCAACACCGGGGGGGCAGGCGAATTTTACCCTGCCGGGAATCGCTGCGGCGGTGCCGATGGAAG
AAAAACAGCCCGGCATCTATGAGGGCTCCTACGTGATCAAACGCGGCGACCAGGGCGGCGATCTGCGCCTGGCAGTCACC
TTGCGCGGCTCCAATGGCAGCGCCACCACCCAGGTGTGGACCCAGGGAATCAATATCAATCGCTAG

Upstream 100 bases:

>100_bases
ATATCGGGTCTCACTGATTGCATACAAGCCTTTTTCAGGTCGGCCCCTGATGTCCAGGAAGTAAATTGTCTGGAGAAATA
GTGGCTTGCGGTAAAACTGG

Downstream 100 bases:

>100_bases
AGCAGGTATCAGGTGTCAGGGTTAAAACGCTTGTTCACCAGGGTTTGCAAGCGGTTGGCGAGTGTTTGTTCAACTGAAAA
GCGCTCAAAGAGGATGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: 1,4-beta-cellobiohydrolase; Exocellobiohydrolase [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MDRTPRIESLEGMKNGWQGTVGLVVCATLATGAQAAEFKDIAGYWGSSYVETLADRRFVAGFPDDTFRPDAPVTRAQLAA
MAARAFDLPESQVSSLTFKDVSPNYWAAKAIATVADRGLASGFPDGNFHPEDLLTRAQAIVIFSQVLGRFSRNNTEGALA
GYTDAEAVPDWAKPGIEKAAAASIIVSYPDPNVIKPNTVATRGEVAAMMYQTLIRLGISLPPLDIGVVGSDDRPTVPREE
RAAAERVAIERLVLQPELNVFRSGDELSVRAFATPGGQANFTLPGIAAAVPMEEKQPGIYEGSYVIKRGDQGGDLRLAVT
LRGSNGSATTQVWTQGININR

Sequences:

>Translated_341_residues
MDRTPRIESLEGMKNGWQGTVGLVVCATLATGAQAAEFKDIAGYWGSSYVETLADRRFVAGFPDDTFRPDAPVTRAQLAA
MAARAFDLPESQVSSLTFKDVSPNYWAAKAIATVADRGLASGFPDGNFHPEDLLTRAQAIVIFSQVLGRFSRNNTEGALA
GYTDAEAVPDWAKPGIEKAAAASIIVSYPDPNVIKPNTVATRGEVAAMMYQTLIRLGISLPPLDIGVVGSDDRPTVPREE
RAAAERVAIERLVLQPELNVFRSGDELSVRAFATPGGQANFTLPGIAAAVPMEEKQPGIYEGSYVIKRGDQGGDLRLAVT
LRGSNGSATTQVWTQGININR
>Mature_341_residues
MDRTPRIESLEGMKNGWQGTVGLVVCATLATGAQAAEFKDIAGYWGSSYVETLADRRFVAGFPDDTFRPDAPVTRAQLAA
MAARAFDLPESQVSSLTFKDVSPNYWAAKAIATVADRGLASGFPDGNFHPEDLLTRAQAIVIFSQVLGRFSRNNTEGALA
GYTDAEAVPDWAKPGIEKAAAASIIVSYPDPNVIKPNTVATRGEVAAMMYQTLIRLGISLPPLDIGVVGSDDRPTVPREE
RAAAERVAIERLVLQPELNVFRSGDELSVRAFATPGGQANFTLPGIAAAVPMEEKQPGIYEGSYVIKRGDQGGDLRLAVT
LRGSNGSATTQVWTQGININR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010502
- InterPro:   IPR008960
- InterPro:   IPR015922
- InterPro:   IPR003305
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR018087
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02018 CBM_4_9; PF06452 DUF1083; PF00331 Glyco_hydro_10; PF00395 SLH [H]

EC number: =3.2.1.91 [H]

Molecular weight: Translated: 36441; Mature: 36441

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTPRIESLEGMKNGWQGTVGLVVCATLATGAQAAEFKDIAGYWGSSYVETLADRRFVA
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCEEE
GFPDDTFRPDAPVTRAQLAAMAARAFDLPESQVSSLTFKDVSPNYWAAKAIATVADRGLA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCCHHHHHHHHHHHHHHHH
SGFPDGNFHPEDLLTRAQAIVIFSQVLGRFSRNNTEGALAGYTDAEAVPDWAKPGIEKAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHCCCHHHHH
AASIIVSYPDPNVIKPNTVATRGEVAAMMYQTLIRLGISLPPLDIGVVGSDDRPTVPREE
HEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHH
RAAAERVAIERLVLQPELNVFRSGDELSVRAFATPGGQANFTLPGIAAAVPMEEKQPGIY
HHHHHHHHHHHHHHCCCHHHEECCCCEEEEEEECCCCCCEEECCCHHEECCCCCCCCCEE
EGSYVIKRGDQGGDLRLAVTLRGSNGSATTQVWTQGININR
CCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDRTPRIESLEGMKNGWQGTVGLVVCATLATGAQAAEFKDIAGYWGSSYVETLADRRFVA
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCEEE
GFPDDTFRPDAPVTRAQLAAMAARAFDLPESQVSSLTFKDVSPNYWAAKAIATVADRGLA
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCEEEECCCCCHHHHHHHHHHHHHHHH
SGFPDGNFHPEDLLTRAQAIVIFSQVLGRFSRNNTEGALAGYTDAEAVPDWAKPGIEKAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHCCCHHHHH
AASIIVSYPDPNVIKPNTVATRGEVAAMMYQTLIRLGISLPPLDIGVVGSDDRPTVPREE
HEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHH
RAAAERVAIERLVLQPELNVFRSGDELSVRAFATPGGQANFTLPGIAAAVPMEEKQPGIY
HHHHHHHHHHHHHHCCCHHHEECCCCEEEEEEECCCCCCEEECCCHHEECCCCCCCCCEE
EGSYVIKRGDQGGDLRLAVTLRGSNGSATTQVWTQGININR
CCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA