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The map label for this gene is 37523640

Identifier: 37523640

GI number: 37523640

Start: 4265023

End: 4265616

Strand: Reverse

Name: 37523640

Synonym: gll4071

Alternate gene names: NA

Gene position: 4265616-4265023 (Counterclockwise)

Preceding gene: 37523643

Following gene: 37523639

Centisome position: 91.56

GC content: 64.65

Gene sequence:

>594_bases
ATGGAACCTTCTGCGAACGTTACCCAACTGCTGCTCGACTGGCGCAACGGGGATCAGCAGGCGCTGATCCAACTGACGCC
TTTGATTCACAAGGAACTGCACGGGCTGGCCGCCCACCTGTTGCGCGCTGAGCGTTCCGGTCATACGCTCCAGGCCACGG
CCCTGGTCAACGAAGCGTATTTGCGGATGGTCGATCAAGGGGGTGTGGCCTGGAGCAACCGCGCTCATTTTCTGGCGATT
GCCGCCAAATCGATGCGGCGTATCCTCGTCGAGCACGCCCGCGCCCACCGGCGGCTCAAGCGCGGTGGCGGGGCGGTCAA
GGTTTCGCTCGATCGGGTGGCCGAGCCGGCTGCTGCGGAGCGCGACGAGGAACTGCTCGTGCTCGACGAAGCGCTCGACG
CGTTGGCCAAAGTTGACCCCCAGCAAAGCCGGCTGGTAGAACTGCGCTACTTCGGCGGGCTGACTATCGAGCAAACCGCC
GAGGCGCTCGCCCTATCCCCCGCCACGGTCAAACGCCACTGGAATATCGCCAGGGCCTGGCTGCACTGTTGGATGAGCGG
CGATGCCGCCGAGCGCGATGCGCTGTCTTCTTAG

Upstream 100 bases:

>100_bases
GACAGTGTATACGCGACAGGCACGCGCAGGGAAGGTGTCGAAACCGGCAACCGGTTTGTGCCCCTAGTGCAGGTACAGCT
GACCGTTTGGGAAATTGGCG

Downstream 100 bases:

>100_bases
GCCCGACGGGAGTCTGCGACCACACGCTTAATCAACCGATAAACAATAATGGGTAAGCTTTGGGTTTGTTTCCGGGCCGA
GAGGGACAGGCATGCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; ECF Sigma Factor Family Protein; Sigma Factor; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-E Factor; Sigma-70 Region 4 Family; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MEPSANVTQLLLDWRNGDQQALIQLTPLIHKELHGLAAHLLRAERSGHTLQATALVNEAYLRMVDQGGVAWSNRAHFLAI
AAKSMRRILVEHARAHRRLKRGGGAVKVSLDRVAEPAAAERDEELLVLDEALDALAKVDPQQSRLVELRYFGGLTIEQTA
EALALSPATVKRHWNIARAWLHCWMSGDAAERDALSS

Sequences:

>Translated_197_residues
MEPSANVTQLLLDWRNGDQQALIQLTPLIHKELHGLAAHLLRAERSGHTLQATALVNEAYLRMVDQGGVAWSNRAHFLAI
AAKSMRRILVEHARAHRRLKRGGGAVKVSLDRVAEPAAAERDEELLVLDEALDALAKVDPQQSRLVELRYFGGLTIEQTA
EALALSPATVKRHWNIARAWLHCWMSGDAAERDALSS
>Mature_197_residues
MEPSANVTQLLLDWRNGDQQALIQLTPLIHKELHGLAAHLLRAERSGHTLQATALVNEAYLRMVDQGGVAWSNRAHFLAI
AAKSMRRILVEHARAHRRLKRGGGAVKVSLDRVAEPAAAERDEELLVLDEALDALAKVDPQQSRLVELRYFGGLTIEQTA
EALALSPATVKRHWNIARAWLHCWMSGDAAERDALSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21811; Mature: 21811

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSANVTQLLLDWRNGDQQALIQLTPLIHKELHGLAAHLLRAERSGHTLQATALVNEAY
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
LRMVDQGGVAWSNRAHFLAIAAKSMRRILVEHARAHRRLKRGGGAVKVSLDRVAEPAAAE
HHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCC
RDEELLVLDEALDALAKVDPQQSRLVELRYFGGLTIEQTAEALALSPATVKRHWNIARAW
CCCCEEHHHHHHHHHHHCCCCHHHEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LHCWMSGDAAERDALSS
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEPSANVTQLLLDWRNGDQQALIQLTPLIHKELHGLAAHLLRAERSGHTLQATALVNEAY
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
LRMVDQGGVAWSNRAHFLAIAAKSMRRILVEHARAHRRLKRGGGAVKVSLDRVAEPAAAE
HHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCC
RDEELLVLDEALDALAKVDPQQSRLVELRYFGGLTIEQTAEALALSPATVKRHWNIARAW
CCCCEEHHHHHHHHHHHCCCCHHHEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LHCWMSGDAAERDALSS
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA