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The map label for this gene is 37523517

Identifier: 37523517

GI number: 37523517

Start: 4143145

End: 4144389

Strand: Reverse

Name: 37523517

Synonym: gll3948

Alternate gene names: NA

Gene position: 4144389-4143145 (Counterclockwise)

Preceding gene: 37523518

Following gene: 37523516

Centisome position: 88.95

GC content: 66.67

Gene sequence:

>1245_bases
ATGCTGGAGAACCCTGCCGATCAGATACGCGGGCGGATAGATGATATCTATCGCTTTGAATCGCGTCGCGTCTTCGCAAG
CCTCATCCGTCTGCTGGGGGACTTTGACCTGGCCGAGGAGGCCATGCACGAAGCCTTCACCGCCGCCGTCGAGCAATGGC
CACGGGACGGCCTACCTGCCAACCCGCGAACATGGTTAGTGTCGGTGGGCCGCTTCAGGGGGATCGATGCCCTTCGGCGG
CGCACCCGCTTCGACGCCTCGGTTGACCAACTCGCCCGGCAACTGGACGCCCACGCCACTGCGCCCGGTGGAGACGAGGA
TGTCGAGGACGACCGATTGCGCCTGATTTTTACCTGTTGTCATCCTGTCCTATCCAGCGAAGCGCAGGTGGCGATGACTC
TGCGGGAAGTGTGTGGGCTGACGACCGAAGCTGTCGCAAGTGCCTTCCTCGTTGCTCCCGCCGCCCTGGCCCAGCGGATC
GTGCGTGCCAAAGCGCGGCTGCGCGAGGCGTCCATTCCGTACCAGGTGCCGTCTACGGCCGACCTGCCTGAACGCTTGGA
CAGGGTGCTCCAGGTGATCTACCTGGTGTTCAACGAGGGATACCTGGCCTCCTCCGGTGACGCCCTGACGCGGGCGGATC
TTGTGGAAGAAGCCCTTCGTCTGGGGCGACTGCTCCTGGAACTTCTGCCGCAGGCCGAGGTGGCGGGGCTCCTCGGCCTG
CTGCTGTTGCAAGAATCGCGCCGCGCCGCACGCACTTCGTCGACGGGCGATGTGGTCCTGCTTGAGGATCAAGACCGTAC
CCTCTGGAACCAGCCGCAGATCGCCGAGGGCAGGGCGCTGGTGCAGCAGGCCCTGGCGTCGGGCCGGTTCGGTCGGTACA
CGCTCCAGGCGGCCATCGCGGCGGTGCACGCCACAGCACCGAGTGTTGAGGCAACCGACTGGGCCCGGGTGGTTGCCCTC
TACGACCTGCTCGCCCAAGTCGAACCGTCGCCGGTCATCGACTTGAATCGGGCGGTGGCGGTGGCGATGCGCGACGGCCC
CCTGGCGGGGTTGGAGCTGATCGACGCCCTCCTATCCCGGGGAGACCTGGCGCACTACTACCTCGCCCATGCGGCGCGGG
CCGACCTGTGTCGGCGGCTGGGCAGGACCGCCGAGGCAAAGACGTCCTACCGGCGCGCCCTCGCCCTGGTGAAACAGGAA
GCCGAGCGGCGCTTCCTCGAAAGACGCCTGCGGGAGATGGGCTGA

Upstream 100 bases:

>100_bases
CTCGAGAGTACCCCCGACTGACGAGGCCATCCATTTTCGGGGGTGCCTGCGCTTTCTGTGCTGCTTCCTCACAATGGTTA
GAGAACGGGCAGTGCGATGG

Downstream 100 bases:

>100_bases
ACGAACGGTCCTTCTACGGAAAAAATCTGCCCGCAGTGTCGATTGGGCGAGTTCCAGTTCGACTAGGTAGCAGAGCAAGG
GTTGAGACGCGGTCTTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLENPADQIRGRIDDIYRFESRRVFASLIRLLGDFDLAEEAMHEAFTAAVEQWPRDGLPANPRTWLVSVGRFRGIDALRR
RTRFDASVDQLARQLDAHATAPGGDEDVEDDRLRLIFTCCHPVLSSEAQVAMTLREVCGLTTEAVASAFLVAPAALAQRI
VRAKARLREASIPYQVPSTADLPERLDRVLQVIYLVFNEGYLASSGDALTRADLVEEALRLGRLLLELLPQAEVAGLLGL
LLLQESRRAARTSSTGDVVLLEDQDRTLWNQPQIAEGRALVQQALASGRFGRYTLQAAIAAVHATAPSVEATDWARVVAL
YDLLAQVEPSPVIDLNRAVAVAMRDGPLAGLELIDALLSRGDLAHYYLAHAARADLCRRLGRTAEAKTSYRRALALVKQE
AERRFLERRLREMG

Sequences:

>Translated_414_residues
MLENPADQIRGRIDDIYRFESRRVFASLIRLLGDFDLAEEAMHEAFTAAVEQWPRDGLPANPRTWLVSVGRFRGIDALRR
RTRFDASVDQLARQLDAHATAPGGDEDVEDDRLRLIFTCCHPVLSSEAQVAMTLREVCGLTTEAVASAFLVAPAALAQRI
VRAKARLREASIPYQVPSTADLPERLDRVLQVIYLVFNEGYLASSGDALTRADLVEEALRLGRLLLELLPQAEVAGLLGL
LLLQESRRAARTSSTGDVVLLEDQDRTLWNQPQIAEGRALVQQALASGRFGRYTLQAAIAAVHATAPSVEATDWARVVAL
YDLLAQVEPSPVIDLNRAVAVAMRDGPLAGLELIDALLSRGDLAHYYLAHAARADLCRRLGRTAEAKTSYRRALALVKQE
AERRFLERRLREMG
>Mature_414_residues
MLENPADQIRGRIDDIYRFESRRVFASLIRLLGDFDLAEEAMHEAFTAAVEQWPRDGLPANPRTWLVSVGRFRGIDALRR
RTRFDASVDQLARQLDAHATAPGGDEDVEDDRLRLIFTCCHPVLSSEAQVAMTLREVCGLTTEAVASAFLVAPAALAQRI
VRAKARLREASIPYQVPSTADLPERLDRVLQVIYLVFNEGYLASSGDALTRADLVEEALRLGRLLLELLPQAEVAGLLGL
LLLQESRRAARTSSTGDVVLLEDQDRTLWNQPQIAEGRALVQQALASGRFGRYTLQAAIAAVHATAPSVEATDWARVVAL
YDLLAQVEPSPVIDLNRAVAVAMRDGPLAGLELIDALLSRGDLAHYYLAHAARADLCRRLGRTAEAKTSYRRALALVKQE
AERRFLERRLREMG

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 45804; Mature: 45804

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENPADQIRGRIDDIYRFESRRVFASLIRLLGDFDLAEEAMHEAFTAAVEQWPRDGLPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NPRTWLVSVGRFRGIDALRRRTRFDASVDQLARQLDAHATAPGGDEDVEDDRLRLIFTCC
CCHHHHEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
HPVLSSEAQVAMTLREVCGLTTEAVASAFLVAPAALAQRIVRAKARLREASIPYQVPSTA
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DLPERLDRVLQVIYLVFNEGYLASSGDALTRADLVEEALRLGRLLLELLPQAEVAGLLGL
CHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLLQESRRAARTSSTGDVVLLEDQDRTLWNQPQIAEGRALVQQALASGRFGRYTLQAAIA
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
AVHATAPSVEATDWARVVALYDLLAQVEPSPVIDLNRAVAVAMRDGPLAGLELIDALLSR
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHEEEEECCCCCHHHHHHHHHHCC
GDLAHYYLAHAARADLCRRLGRTAEAKTSYRRALALVKQEAERRFLERRLREMG
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLENPADQIRGRIDDIYRFESRRVFASLIRLLGDFDLAEEAMHEAFTAAVEQWPRDGLPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NPRTWLVSVGRFRGIDALRRRTRFDASVDQLARQLDAHATAPGGDEDVEDDRLRLIFTCC
CCHHHHEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
HPVLSSEAQVAMTLREVCGLTTEAVASAFLVAPAALAQRIVRAKARLREASIPYQVPSTA
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DLPERLDRVLQVIYLVFNEGYLASSGDALTRADLVEEALRLGRLLLELLPQAEVAGLLGL
CHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLLQESRRAARTSSTGDVVLLEDQDRTLWNQPQIAEGRALVQQALASGRFGRYTLQAAIA
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
AVHATAPSVEATDWARVVALYDLLAQVEPSPVIDLNRAVAVAMRDGPLAGLELIDALLSR
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHEEEEECCCCCHHHHHHHHHHCC
GDLAHYYLAHAARADLCRRLGRTAEAKTSYRRALALVKQEAERRFLERRLREMG
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]