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The map label for this gene is 37523504

Identifier: 37523504

GI number: 37523504

Start: 4132052

End: 4132876

Strand: Direct

Name: 37523504

Synonym: glr3935

Alternate gene names: NA

Gene position: 4132052-4132876 (Clockwise)

Preceding gene: 37523503

Following gene: 37523509

Centisome position: 88.69

GC content: 56.85

Gene sequence:

>825_bases
ATTACACCCGCCGCCCTCAGCGCCTCAAGTATGTTCTTGATCGAAGATTTGCTCGATCGCATCCAGCGGATGAGTGGTCC
CGAGCAGACGCAGGTGATGTTCGATCTTGTCAGACGGGCCGACTCCCCTATCAGCCGTTCTTATAGCTCCTACAGCGCCA
ACACCAAGCTTGGTTTCTGGTATCAGCTGGCCCGGTGGATGGCAGACGGTCTGGTCGCCCCTATTCAGTACGGTTACGAG
TTGTCTTCCCAAGGACAGGAGCTGTTCGAGACCCTCAAACAGTTGGATGGCGGCCAGCAAATTCAGATCCTGCGCGACAT
CGTGGTGAACATGGGGTACGATCCTTCCATCGCCAAGGTTGCTGCAGAACCGGTCGAATTCGATTTCATCCGCACCGAGC
CGGTCGCCGCTGCCAAGCCCCACATTGAAGGCATCAAAGAACCGGTGGTGTTGGCTTACTTTGAGGCGATGAATACCGAT
AACTTCGATGCCGCCGTTGCTCTGTTTGCTCCCGACGGCGCCCTGCAGCCGCCGTTCAGAGAACCGATAGTCGGCCATCA
GGCAATCGCTGCCTACATGCGCGAAGAGGCCAAGGGCCTGACCCTGATGCCGCAGCAGGGCATCAGTCAGGTCTTGGGCG
ATGGGTCCAAGCAGTTGAAGATTACGGGCAAAGTTCAGACTCCCTGGTTTGGCGTCAACGTTGCGATGAATATTGCCTGG
CGGTTTGCCCTGAACCCGGAAGGAAAAATCTTCTATGTAGGGATCGATCTGCTGGCTTCTCCCCAGGAGCTGCTGAACCT
GCGACCGGACAAGCTAGCCCGTTAG

Upstream 100 bases:

>100_bases
CCCCAGTCCGATTCCAGCCATCCTCGACCAGTTCAATCAACTGAGTACGGAGGACCAGCTGGCCTTACTGTGGTACGCCT
ACACAGAGACGGGTCAATCT

Downstream 100 bases:

>100_bases
TTGGAGAAGCGATTGCGGTCCGAGGTCAGCAAGCTCATCCGGTAGTGGGAGTGCCGGATTTGGCTTTGATCTCGACCGCT
TTTCCTTGCGATGTTGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: OCP; RCP [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTPAALSASSMFLIEDLLDRIQRMSGPEQTQVMFDLVRRADSPISRSYSSYSANTKLGFWYQLARWMADGLVAPIQYGYE
LSSQGQELFETLKQLDGGQQIQILRDIVVNMGYDPSIAKVAAEPVEFDFIRTEPVAAAKPHIEGIKEPVVLAYFEAMNTD
NFDAAVALFAPDGALQPPFREPIVGHQAIAAYMREEAKGLTLMPQQGISQVLGDGSKQLKITGKVQTPWFGVNVAMNIAW
RFALNPEGKIFYVGIDLLASPQELLNLRPDKLAR

Sequences:

>Translated_274_residues
MTPAALSASSMFLIEDLLDRIQRMSGPEQTQVMFDLVRRADSPISRSYSSYSANTKLGFWYQLARWMADGLVAPIQYGYE
LSSQGQELFETLKQLDGGQQIQILRDIVVNMGYDPSIAKVAAEPVEFDFIRTEPVAAAKPHIEGIKEPVVLAYFEAMNTD
NFDAAVALFAPDGALQPPFREPIVGHQAIAAYMREEAKGLTLMPQQGISQVLGDGSKQLKITGKVQTPWFGVNVAMNIAW
RFALNPEGKIFYVGIDLLASPQELLNLRPDKLAR
>Mature_273_residues
TPAALSASSMFLIEDLLDRIQRMSGPEQTQVMFDLVRRADSPISRSYSSYSANTKLGFWYQLARWMADGLVAPIQYGYEL
SSQGQELFETLKQLDGGQQIQILRDIVVNMGYDPSIAKVAAEPVEFDFIRTEPVAAAKPHIEGIKEPVVLAYFEAMNTDN
FDAAVALFAPDGALQPPFREPIVGHQAIAAYMREEAKGLTLMPQQGISQVLGDGSKQLKITGKVQTPWFGVNVAMNIAWR
FALNPEGKIFYVGIDLLASPQELLNLRPDKLAR

Specific function: Acts as a photo-protectant. Essential for inhibiting white and blue-green light non-photochemical quenching (NPQ). Binding carotenoids improves OCP's intrinsic photoprotectant activity by broadening its absorption spectrum and facilitating the dissipation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane. Note=Associated with the phycobilisome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002075
- InterPro:   IPR015233 [H]

Pfam domain/function: PF09150 Carot_N; PF02136 NTF2 [H]

EC number: NA

Molecular weight: Translated: 30356; Mature: 30225

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAALSASSMFLIEDLLDRIQRMSGPEQTQVMFDLVRRADSPISRSYSSYSANTKLGFW
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHH
YQLARWMADGLVAPIQYGYELSSQGQELFETLKQLDGGQQIQILRDIVVNMGYDPSIAKV
HHHHHHHHCCCCHHHHHCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH
AAEPVEFDFIRTEPVAAAKPHIEGIKEPVVLAYFEAMNTDNFDAAVALFAPDGALQPPFR
HCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
EPIVGHQAIAAYMREEAKGLTLMPQQGISQVLGDGSKQLKITGKVQTPWFGVNVAMNIAW
CCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEEEEE
RFALNPEGKIFYVGIDLLASPQELLNLRPDKLAR
EEEECCCCCEEEEEECCCCCCHHHHCCCCHHHCC
>Mature Secondary Structure 
TPAALSASSMFLIEDLLDRIQRMSGPEQTQVMFDLVRRADSPISRSYSSYSANTKLGFW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHH
YQLARWMADGLVAPIQYGYELSSQGQELFETLKQLDGGQQIQILRDIVVNMGYDPSIAKV
HHHHHHHHCCCCHHHHHCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH
AAEPVEFDFIRTEPVAAAKPHIEGIKEPVVLAYFEAMNTDNFDAAVALFAPDGALQPPFR
HCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
EPIVGHQAIAAYMREEAKGLTLMPQQGISQVLGDGSKQLKITGKVQTPWFGVNVAMNIAW
CCCCHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEEEEE
RFALNPEGKIFYVGIDLLASPQELLNLRPDKLAR
EEEECCCCCEEEEEECCCCCCHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA