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The map label for this gene is rpmC

Identifier: 37523488

GI number: 37523488

Start: 4115144

End: 4115356

Strand: Reverse

Name: rpmC

Synonym: gvip527

Alternate gene names: 37523488

Gene position: 4115356-4115144 (Counterclockwise)

Preceding gene: 37523489

Following gene: 37523487

Centisome position: 88.33

GC content: 57.75

Gene sequence:

>213_bases
ATGCCCCTACCTAAAATTGACGACTGGCGCGAACTCAGCGACGAGGAGATTTCCGAGCAGATCCTCGCCACCAAAAAAGA
ACTGTTCGAACTGCGGTTGCAAAAGGCGACGCGCCAGCTCGAAAAGCCGCACCTCGTGCGCCACGCCAAGCACAAGCTCG
CCCAGCTGATGCTGCTTGAAAGCCAGCGCACTGCCGCCGCCAAGGAGAAATAA

Upstream 100 bases:

>100_bases
GAGATTGCCCGCGAGGCGATGCGTCTGGCGGCGGCCAAGCTGCCCATCAAATCTCGATTTATCGTCAAAAGCGAGACTGC
CCCCGCTGAGGAGCCGACCA

Downstream 100 bases:

>100_bases
CCCATGCCGCGCAAAGAAAAAATCGGATTGGTGGTCAGTGACGCGATGCAAAAGACGGTGGTGGTCGCCGTCGAAAACCG
CGTCCCCCACCCCAAGTACA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MPLPKIDDWRELSDEEISEQILATKKELFELRLQKATRQLEKPHLVRHAKHKLAQLMLLESQRTAAAKEK

Sequences:

>Translated_70_residues
MPLPKIDDWRELSDEEISEQILATKKELFELRLQKATRQLEKPHLVRHAKHKLAQLMLLESQRTAAAKEK
>Mature_69_residues
PLPKIDDWRELSDEEISEQILATKKELFELRLQKATRQLEKPHLVRHAKHKLAQLMLLESQRTAAAKEK

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_GLOVI (Q7NEG0)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926865.1
- ProteinModelPortal:   Q7NEG0
- SMR:   Q7NEG0
- GeneID:   2602322
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3919
- HOGENOM:   HBG730819
- OMA:   NTHRFKE
- ProtClustDB:   PRK00306
- BioCyc:   GVIO251221:GSL3919-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8258; Mature: 8127

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPKIDDWRELSDEEISEQILATKKELFELRLQKATRQLEKPHLVRHAKHKLAQLMLLE
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SQRTAAAKEK
HHHHHHCCCC
>Mature Secondary Structure 
PLPKIDDWRELSDEEISEQILATKKELFELRLQKATRQLEKPHLVRHAKHKLAQLMLLE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SQRTAAAKEK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292