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The map label for this gene is ynaI [C]

Identifier: 37523439

GI number: 37523439

Start: 4075744

End: 4076865

Strand: Direct

Name: ynaI [C]

Synonym: glr3870

Alternate gene names: 37523439

Gene position: 4075744-4076865 (Clockwise)

Preceding gene: 37523437

Following gene: 37523443

Centisome position: 87.48

GC content: 59.98

Gene sequence:

>1122_bases
ATGACATTGAACGAAATTTTTGATTTTCCAATTTTGGGCCAGACGCTGCTTGCCTGGCTGGTGGCGGTGGCGGTGGCCGT
TGGTGTCTATGGGCTGCTGCAGACGTTGCGCTACTTGATCGGACGGCGCGTTGAAGCTTTGCCCGATGGGTGGGGAAAAT
TGACGGGCCGGCTGCTCGAAGTGACCCAGCCGCTGTTTCTGGCCGCGGTGGCGCTGTATTTTGGGGCGCAGGTGCTGGCG
TTGCCTGCAGGTCAGGTACGGGTGCTCGATGGAGCCGTGACGATCGTGGCCCTGCTGCAGGTGGGGTTGTGGGGAAACGC
CCTGTTTGGCCACTGGTTTGAGAATTATCGCCAGTCGCGCGGGGCCGGACAGGGAGCCGCCACCCTCGGCATTTTGAGCT
TTCTGGCCCGGCTGTTGCTCTGGTCGGTGCTGCTGTTGGTGGCCCTGGCCAACCTCGGCTTCGACATCACGGCGTTGGTG
GCAAGCCTCGGCATCGGCGGCATCGCCGTCGGCCTCGCGGTGCAGAACATTCTTGGCGATCTGTTCGCCTCGCTGTCGAT
CGTGCTCGACAAGCCCTTTGAAGTGGGCGACTTCATCATCGTCGGCGAGCTGATGGGCACCGTCGAATACATCGGTTTGA
AGACCACCCGGGTGCGCAGCATCTCCGGAGAACAATTGATCTTTGCCAACGGCGATCTGGTCAAAAATCCGATTCGCAAC
TTCAAGACCCTCAGCGAGAGGCGGGTCTGTTTTGAGATCGGCCTCACCTACCAGACCCCCGCCGCCAAACTCGAACAGGT
GCCCGCCATCGTCCGCGCGATTATCGAGAGCCGGCCGGAGGTGCGCTTCGACCGTGTTCACTTCAAGGCACTTGCCGATT
CGGCCCTTACCTTTGAAATCGTCTATTTTGTGCTGAGCGCCAACTACACCCTGTTTATGGATGCTCAGCAAGCCATCAAC
CTGGCCATCTTCAAGCGCTTCGAGCAGGAGCAGATTGCTTTTGCCTATCCCACGCGGACCTTGTTTATCGACCAGGCAGC
TGCCAATGTAGCGGTGCGGATGCTGAACGGCAACGGCGTTCAGTCGGAGCGCTCCCGCCGGCCTACTGCAGATGGCGGCT
AA

Upstream 100 bases:

>100_bases
GACGGGGGGCGACGACGGGTCCGGGGGATGTTGGAAGTCCGCCGCGGGCTGACCGGATTCATTGCGCAAGCAATCGGCCG
ACTTTTCAGGAGACATCCGG

Downstream 100 bases:

>100_bases
AAAAGCGGGCGGTGCGCTCCTCCAGACGCACGCGCACGACCGGATCCGGCACCATGTGGGTCAGGCCGCTCAAGGGCAGG
ACCTCGTGCTCCCGTCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTLNEIFDFPILGQTLLAWLVAVAVAVGVYGLLQTLRYLIGRRVEALPDGWGKLTGRLLEVTQPLFLAAVALYFGAQVLA
LPAGQVRVLDGAVTIVALLQVGLWGNALFGHWFENYRQSRGAGQGAATLGILSFLARLLLWSVLLLVALANLGFDITALV
ASLGIGGIAVGLAVQNILGDLFASLSIVLDKPFEVGDFIIVGELMGTVEYIGLKTTRVRSISGEQLIFANGDLVKNPIRN
FKTLSERRVCFEIGLTYQTPAAKLEQVPAIVRAIIESRPEVRFDRVHFKALADSALTFEIVYFVLSANYTLFMDAQQAIN
LAIFKRFEQEQIAFAYPTRTLFIDQAAANVAVRMLNGNGVQSERSRRPTADGG

Sequences:

>Translated_373_residues
MTLNEIFDFPILGQTLLAWLVAVAVAVGVYGLLQTLRYLIGRRVEALPDGWGKLTGRLLEVTQPLFLAAVALYFGAQVLA
LPAGQVRVLDGAVTIVALLQVGLWGNALFGHWFENYRQSRGAGQGAATLGILSFLARLLLWSVLLLVALANLGFDITALV
ASLGIGGIAVGLAVQNILGDLFASLSIVLDKPFEVGDFIIVGELMGTVEYIGLKTTRVRSISGEQLIFANGDLVKNPIRN
FKTLSERRVCFEIGLTYQTPAAKLEQVPAIVRAIIESRPEVRFDRVHFKALADSALTFEIVYFVLSANYTLFMDAQQAIN
LAIFKRFEQEQIAFAYPTRTLFIDQAAANVAVRMLNGNGVQSERSRRPTADGG
>Mature_372_residues
TLNEIFDFPILGQTLLAWLVAVAVAVGVYGLLQTLRYLIGRRVEALPDGWGKLTGRLLEVTQPLFLAAVALYFGAQVLAL
PAGQVRVLDGAVTIVALLQVGLWGNALFGHWFENYRQSRGAGQGAATLGILSFLARLLLWSVLLLVALANLGFDITALVA
SLGIGGIAVGLAVQNILGDLFASLSIVLDKPFEVGDFIIVGELMGTVEYIGLKTTRVRSISGEQLIFANGDLVKNPIRNF
KTLSERRVCFEIGLTYQTPAAKLEQVPAIVRAIIESRPEVRFDRVHFKALADSALTFEIVYFVLSANYTLFMDAQQAINL
AIFKRFEQEQIAFAYPTRTLFIDQAAANVAVRMLNGNGVQSERSRRPTADGG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=234, Percent_Identity=27.7777777777778, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789291, Length=264, Percent_Identity=29.9242424242424, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 40602; Mature: 40471

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNEIFDFPILGQTLLAWLVAVAVAVGVYGLLQTLRYLIGRRVEALPDGWGKLTGRLLE
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
VTQPLFLAAVALYFGAQVLALPAGQVRVLDGAVTIVALLQVGLWGNALFGHWFENYRQSR
HHHHHHHHHHHHHHCCHHEEECCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GAGQGAATLGILSFLARLLLWSVLLLVALANLGFDITALVASLGIGGIAVGLAVQNILGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
LFASLSIVLDKPFEVGDFIIVGELMGTVEYIGLKTTRVRSISGEQLIFANGDLVKNPIRN
HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHEECCCCCEEEEECCCHHHHHHHH
FKTLSERRVCFEIGLTYQTPAAKLEQVPAIVRAIIESRPEVRFDRVHFKALADSALTFEI
HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
VYFVLSANYTLFMDAQQAINLAIFKRFEQEQIAFAYPTRTLFIDQAAANVAVRMLNGNGV
HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHEEEEECCCCC
QSERSRRPTADGG
CCHHHCCCCCCCC
>Mature Secondary Structure 
TLNEIFDFPILGQTLLAWLVAVAVAVGVYGLLQTLRYLIGRRVEALPDGWGKLTGRLLE
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHH
VTQPLFLAAVALYFGAQVLALPAGQVRVLDGAVTIVALLQVGLWGNALFGHWFENYRQSR
HHHHHHHHHHHHHHCCHHEEECCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GAGQGAATLGILSFLARLLLWSVLLLVALANLGFDITALVASLGIGGIAVGLAVQNILGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
LFASLSIVLDKPFEVGDFIIVGELMGTVEYIGLKTTRVRSISGEQLIFANGDLVKNPIRN
HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCHHHEECCCCCEEEEECCCHHHHHHHH
FKTLSERRVCFEIGLTYQTPAAKLEQVPAIVRAIIESRPEVRFDRVHFKALADSALTFEI
HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
VYFVLSANYTLFMDAQQAINLAIFKRFEQEQIAFAYPTRTLFIDQAAANVAVRMLNGNGV
HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHEEEEECCCCC
QSERSRRPTADGG
CCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]