Click here to switch to the map view.

The map label for this gene is tcmH [H]

Identifier: 37523400

GI number: 37523400

Start: 4036414

End: 4037058

Strand: Reverse

Name: tcmH [H]

Synonym: gll3831

Alternate gene names: 37523400

Gene position: 4037058-4036414 (Counterclockwise)

Preceding gene: 37523405

Following gene: 37523399

Centisome position: 86.65

GC content: 64.5

Gene sequence:

>645_bases
ATGCCGCCCACCATTGCCAGAAGCAACGGCCTGACCACCGCCATCATTATCTTCGCCGTGGAACCATCCCGGCAGGCGGA
TTTGCTCGCCAACATCGAACGGTTCTTGATGGCCACGGTCCAGTACCAGGCCGGTTTCGTCTCCGCCACCCTCCACAAAA
GCCTGGACGGCGCCCGCGTGGTCAATTACGCCCAATGGCGCACCGAAGCCGATTACGACGCTTTCGTGCGCAACAGCGAA
GTGCAGGCCGCCACCGGCTGGCTATCGCTGTTTGCCCCGTCCGACAGCCGCCTGTACGCAGTGGCGGCTTCTGAGCCCGA
GAGTCCCGGCACAGTGCTGGCCCCGCATACGGGTGTGCTGGCCGACGTGGCCGTGTTCAAGACCACCCCCGACACCCAGG
AGCAGGCGCTGGCAATGGCCTGCGAAGCTATCGATCTATTGCGGCTGCGGCCGGGGTTCGTCTCGACCCATATCCACCGC
AGCTTCGACGGCACGCGGGTGATCGGTTACAGCCAGTGGCGCTCAGAAAGTGACTTTCGCTCGGTGACAGGCGATCTGCC
CGCCCCAATCCGCAAGCTGTTCGCCGCGGCCGAGTACGAAGCCCAGCCGGCGCTGTTCGATGTCGCTCTCGTCTGGCCGA
ACTGA

Upstream 100 bases:

>100_bases
ACCGGAACGGTCCACGACAACAGCAGCAAAATCCACAACAAAGGCATTGCGTCGGCGGTAAAGCTCAAGGTAGCGTCGGG
GGGCCGCCAGGAAGAGCGCG

Downstream 100 bases:

>100_bases
GCGATGCCGGATCTCACCCCGCGCACGATTGTGCAACTGGTGGCCCTCGACGAGACGGGCGATTCGTACTACCGGATGCG
CTGGCCGGCGGTGCAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPPTIARSNGLTTAIIIFAVEPSRQADLLANIERFLMATVQYQAGFVSATLHKSLDGARVVNYAQWRTEADYDAFVRNSE
VQAATGWLSLFAPSDSRLYAVAASEPESPGTVLAPHTGVLADVAVFKTTPDTQEQALAMACEAIDLLRLRPGFVSTHIHR
SFDGTRVIGYSQWRSESDFRSVTGDLPAPIRKLFAAAEYEAQPALFDVALVWPN

Sequences:

>Translated_214_residues
MPPTIARSNGLTTAIIIFAVEPSRQADLLANIERFLMATVQYQAGFVSATLHKSLDGARVVNYAQWRTEADYDAFVRNSE
VQAATGWLSLFAPSDSRLYAVAASEPESPGTVLAPHTGVLADVAVFKTTPDTQEQALAMACEAIDLLRLRPGFVSTHIHR
SFDGTRVIGYSQWRSESDFRSVTGDLPAPIRKLFAAAEYEAQPALFDVALVWPN
>Mature_213_residues
PPTIARSNGLTTAIIIFAVEPSRQADLLANIERFLMATVQYQAGFVSATLHKSLDGARVVNYAQWRTEADYDAFVRNSEV
QAATGWLSLFAPSDSRLYAVAASEPESPGTVLAPHTGVLADVAVFKTTPDTQEQALAMACEAIDLLRLRPGFVSTHIHRS
FDGTRVIGYSQWRSESDFRSVTGDLPAPIRKLFAAAEYEAQPALFDVALVWPN

Specific function: Putative hydroxylase required for conversion of tetracenomycin F2 to tetracenomycin D3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 23374; Mature: 23242

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTIARSNGLTTAIIIFAVEPSRQADLLANIERFLMATVQYQAGFVSATLHKSLDGARV
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH
VNYAQWRTEADYDAFVRNSEVQAATGWLSLFAPSDSRLYAVAASEPESPGTVLAPHTGVL
HHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCCHH
ADVAVFKTTPDTQEQALAMACEAIDLLRLRPGFVSTHIHRSFDGTRVIGYSQWRSESDFR
HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCHH
SVTGDLPAPIRKLFAAAEYEAQPALFDVALVWPN
HHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
PPTIARSNGLTTAIIIFAVEPSRQADLLANIERFLMATVQYQAGFVSATLHKSLDGARV
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHH
VNYAQWRTEADYDAFVRNSEVQAATGWLSLFAPSDSRLYAVAASEPESPGTVLAPHTGVL
HHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCEEECCCCCHH
ADVAVFKTTPDTQEQALAMACEAIDLLRLRPGFVSTHIHRSFDGTRVIGYSQWRSESDFR
HHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCHH
SVTGDLPAPIRKLFAAAEYEAQPALFDVALVWPN
HHCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA