Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37523383

Identifier: 37523383

GI number: 37523383

Start: 4021055

End: 4021429

Strand: Reverse

Name: 37523383

Synonym: gll3814

Alternate gene names: NA

Gene position: 4021429-4021055 (Counterclockwise)

Preceding gene: 37523384

Following gene: 37523381

Centisome position: 86.31

GC content: 61.33

Gene sequence:

>375_bases
ATGGGCTCGAACTTGACCGAGGTGGCCAGGAATCTCTCCATCGGTTCCTACCGCCGGCATTTGTTTTTGTGCGCCGACCA
GACCAAACCCGCCTGCTGCGATAAAGCGGCAAGCCTGGTCAGCTGGGACTATCTCAAAGGGCGGCTCAAAGCCCTGGGAC
TCGACCGGGGCGAGGCGGCCGTCTTTCGCACCAAGGCCAACTGCCTGCGCGTCTGCCGCGATGGCCCGATTCTGCTGGTC
TATCCGGGTGGTTTCTGGTACCACAGCGCCACCCCTGAGGTGCTCGAGCGCGTCATCCAGGAGCACCTGATAGGCGGGGT
GCCGGTCGCAGAATTTCTGTTTGCCACAAACCCTCTGCTGGAAGAAAGTCACTGA

Upstream 100 bases:

>100_bases
CGGCGACGGCGGGCTTCCCACCCTCACCCCCGATGCGCCCTTGAGCCCTTCGCGCTCCCCTCTACGGTTACGCTAGAGCC
AGTTGCAGGCACTTGCTGAA

Downstream 100 bases:

>100_bases
CGGCTGGAGCCACCCCGGCGAACTTCGCGGGCGCGATCGAAAATTTGCAGTGCACTCAGGCTCAGCCCCGGGGTCATCGG
CTCGGCGAGGGGAGTCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Ferredoxin-Like Protein; Ferredoxin 2Fe-2S; Fe2-S2-Type Ferredoxin; Ferredoxin 2fe-2s Protein; Ferredoxin Like Protein; Ferredoxin 2Fe-2S Protein; Ferredoxin-Like; Cob(I)Alamin Adenosyltransferase; Sucraseferredoxin Family Protein; Ferredoxin 2Fe-2s; Ferredoxin 2fe-2s

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGSNLTEVARNLSIGSYRRHLFLCADQTKPACCDKAASLVSWDYLKGRLKALGLDRGEAAVFRTKANCLRVCRDGPILLV
YPGGFWYHSATPEVLERVIQEHLIGGVPVAEFLFATNPLLEESH

Sequences:

>Translated_124_residues
MGSNLTEVARNLSIGSYRRHLFLCADQTKPACCDKAASLVSWDYLKGRLKALGLDRGEAAVFRTKANCLRVCRDGPILLV
YPGGFWYHSATPEVLERVIQEHLIGGVPVAEFLFATNPLLEESH
>Mature_123_residues
GSNLTEVARNLSIGSYRRHLFLCADQTKPACCDKAASLVSWDYLKGRLKALGLDRGEAAVFRTKANCLRVCRDGPILLVY
PGGFWYHSATPEVLERVIQEHLIGGVPVAEFLFATNPLLEESH

Specific function: Unknown

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13732; Mature: 13601

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNLTEVARNLSIGSYRRHLFLCADQTKPACCDKAASLVSWDYLKGRLKALGLDRGEAA
CCCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VFRTKANCLRVCRDGPILLVYPGGFWYHSATPEVLERVIQEHLIGGVPVAEFLFATNPLL
EEHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
EESH
CCCC
>Mature Secondary Structure 
GSNLTEVARNLSIGSYRRHLFLCADQTKPACCDKAASLVSWDYLKGRLKALGLDRGEAA
CCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VFRTKANCLRVCRDGPILLVYPGGFWYHSATPEVLERVIQEHLIGGVPVAEFLFATNPLL
EEHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
EESH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA