| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523358
Identifier: 37523358
GI number: 37523358
Start: 3997129
End: 3998430
Strand: Direct
Name: 37523358
Synonym: glr3789
Alternate gene names: NA
Gene position: 3997129-3998430 (Clockwise)
Preceding gene: 37523357
Following gene: 37523359
Centisome position: 85.79
GC content: 47.85
Gene sequence:
>1302_bases ATGAGTAGTAAAAGAGCGATTTCGTGGATGTTTGTCTTTCTGTTGATGCTACTAGTCGTTTCCGAACGGTCGTTCAGTCA AACAACCCAAACCGAGGCGTCTCCAGAGGATTTTGGGGCGGCCGGTGATGGCGTCAAAGATGACACTACAAGCCTCCAAA AGGCTTTGCAGTCGGGCAAAAATATTGTACTGAAGAAAACTTACTTTACGAAAGACCTAAACGTTACCACCGCGAACCAG AAGATCTTTGGTGGCGGCAAACTGGTAGCTGCTCCTGGGACTGAGGCGCTACTTTCGATTCGGGCGCCTAACGTTGCCAT CGAAGGCATAAACTTCGTTTTTAGTAACCGCAAAGTAAAATACGGTATCGTCACTTCTGCCCCAGGCACCCGAGTAACCG GCAGTTCTTTTTCTGGCGATATTGGTCACTACATCCTGGGCAACAGTGCCACTGGGCTTACAATCTCTCGCAATGTTTTT AATGGAGCGGGTTCTTCCCAGGGTGCACCCGTAGAGGTTAGCGCAGTTAAGCAGTTCTCCGTCATTGAGAATCAATTTAA GGATGTCACCGGATTCAATCTACAGACACGTTGGTCCCAAGACGGCGAAATTCTGAGAAATAACTTCATTAACCCCAGTC ATGTTTCGACGCTTACTGCTGTGCAAGGCCAATCCACCTTTGAATTTTCCTTGCCCTACCCCACTGCCAGGCAAGGAATA CGGCTCAACGACAAAGTCGTGCCTCCCCAGGGAGGCGTTCTGGGAGGCACAGTTTTTGCAACTGTGAAGGGTACCGGTAA TAAGCGCACTGTTACTCTCGTTGATCGGCAGGGACAGCCCTACCCTTCGCAAGCTGGTGATCGTGTGACACTCGTGGGCT GGCGCTCTCTCGAAAATATCAATATCAATGCTGGCACATCGAGAGTAAAAATAATGGGAAACACGATCGATGGTTCGGGT GATGGAGGCATTGTAATTGCAAGTGATTACAATGTTCGACGCATTTTGGATCCCAAAAACCCAGCCGATTTCCCTCAAGA CATTCTGATAGAGGGTAATAAGATCCGCAATATCCACGCCGAAGGAATCGGAGTTCTATTCTCGAAATCTGAAGGCATTG TTATCCGCAACAACCAGATCGAAGACTGTGGACAAAGCCTTGGTGGATTTTTCTCGTCTTGTATTTTTCTAGCAGCTGAC AATGTTCGACTGGAAAACAACGGCTGTCGGAATACATCTTCCGGCATCACTCTTTACAAAGTTTTCGTCAGTAAGTCTCC ACAAAAGTCTCAACGTCTTTGA
Upstream 100 bases:
>100_bases TCGCTATTTTTAGAATATTGTCGCTGAGCCTTCGTTACGAAAAGCTGAGTCCAAAGGTTCTGTCTGGGCAAGATCGATTC GTTGAAGGAGCTAGAGTGAC
Downstream 100 bases:
>100_bases GGAAACTGATACAGGGAACTGATCCATTTGCTTGCGAGTAAGTGCCTGCATGTCCGTAGACACTTACTCGTGATTTGTCG AATGTTTGCTACCAACACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSSKRAISWMFVFLLMLLVVSERSFSQTTQTEASPEDFGAAGDGVKDDTTSLQKALQSGKNIVLKKTYFTKDLNVTTANQ KIFGGGKLVAAPGTEALLSIRAPNVAIEGINFVFSNRKVKYGIVTSAPGTRVTGSSFSGDIGHYILGNSATGLTISRNVF NGAGSSQGAPVEVSAVKQFSVIENQFKDVTGFNLQTRWSQDGEILRNNFINPSHVSTLTAVQGQSTFEFSLPYPTARQGI RLNDKVVPPQGGVLGGTVFATVKGTGNKRTVTLVDRQGQPYPSQAGDRVTLVGWRSLENININAGTSRVKIMGNTIDGSG DGGIVIASDYNVRRILDPKNPADFPQDILIEGNKIRNIHAEGIGVLFSKSEGIVIRNNQIEDCGQSLGGFFSSCIFLAAD NVRLENNGCRNTSSGITLYKVFVSKSPQKSQRL
Sequences:
>Translated_433_residues MSSKRAISWMFVFLLMLLVVSERSFSQTTQTEASPEDFGAAGDGVKDDTTSLQKALQSGKNIVLKKTYFTKDLNVTTANQ KIFGGGKLVAAPGTEALLSIRAPNVAIEGINFVFSNRKVKYGIVTSAPGTRVTGSSFSGDIGHYILGNSATGLTISRNVF NGAGSSQGAPVEVSAVKQFSVIENQFKDVTGFNLQTRWSQDGEILRNNFINPSHVSTLTAVQGQSTFEFSLPYPTARQGI RLNDKVVPPQGGVLGGTVFATVKGTGNKRTVTLVDRQGQPYPSQAGDRVTLVGWRSLENININAGTSRVKIMGNTIDGSG DGGIVIASDYNVRRILDPKNPADFPQDILIEGNKIRNIHAEGIGVLFSKSEGIVIRNNQIEDCGQSLGGFFSSCIFLAAD NVRLENNGCRNTSSGITLYKVFVSKSPQKSQRL >Mature_432_residues SSKRAISWMFVFLLMLLVVSERSFSQTTQTEASPEDFGAAGDGVKDDTTSLQKALQSGKNIVLKKTYFTKDLNVTTANQK IFGGGKLVAAPGTEALLSIRAPNVAIEGINFVFSNRKVKYGIVTSAPGTRVTGSSFSGDIGHYILGNSATGLTISRNVFN GAGSSQGAPVEVSAVKQFSVIENQFKDVTGFNLQTRWSQDGEILRNNFINPSHVSTLTAVQGQSTFEFSLPYPTARQGIR LNDKVVPPQGGVLGGTVFATVKGTGNKRTVTLVDRQGQPYPSQAGDRVTLVGWRSLENININAGTSRVKIMGNTIDGSGD GGIVIASDYNVRRILDPKNPADFPQDILIEGNKIRNIHAEGIGVLFSKSEGIVIRNNQIEDCGQSLGGFFSSCIFLAADN VRLENNGCRNTSSGITLYKVFVSKSPQKSQRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46458; Mature: 46327
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKRAISWMFVFLLMLLVVSERSFSQTTQTEASPEDFGAAGDGVKDDTTSLQKALQSGK CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC NIVLKKTYFTKDLNVTTANQKIFGGGKLVAAPGTEALLSIRAPNVAIEGINFVFSNRKVK CEEEEEEEEECCCEEEECCCEEECCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCEEE YGIVTSAPGTRVTGSSFSGDIGHYILGNSATGLTISRNVFNGAGSSQGAPVEVSAVKQFS EEEEECCCCCEEECCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHH VIENQFKDVTGFNLQTRWSQDGEILRNNFINPSHVSTLTAVQGQSTFEFSLPYPTARQGI HHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHEEEEEECCCCEEEEECCCCCHHCCC RLNDKVVPPQGGVLGGTVFATVKGTGNKRTVTLVDRQGQPYPSQAGDRVTLVGWRSLENI EECCEECCCCCCEECCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEE NINAGTSRVKIMGNTIDGSGDGGIVIASDYNVRRILDPKNPADFPQDILIEGNKIRNIHA EEECCCCEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCHHEEEECCEEEEEEC EGIGVLFSKSEGIVIRNNQIEDCGQSLGGFFSSCIFLAADNVRLENNGCRNTSSGITLYK CCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCCCCCEEEEE VFVSKSPQKSQRL EEECCCCHHHCCC >Mature Secondary Structure SSKRAISWMFVFLLMLLVVSERSFSQTTQTEASPEDFGAAGDGVKDDTTSLQKALQSGK CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCC NIVLKKTYFTKDLNVTTANQKIFGGGKLVAAPGTEALLSIRAPNVAIEGINFVFSNRKVK CEEEEEEEEECCCEEEECCCEEECCCEEEECCCCCEEEEEECCCEEEEEEEEEEECCEEE YGIVTSAPGTRVTGSSFSGDIGHYILGNSATGLTISRNVFNGAGSSQGAPVEVSAVKQFS EEEEECCCCCEEECCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHH VIENQFKDVTGFNLQTRWSQDGEILRNNFINPSHVSTLTAVQGQSTFEFSLPYPTARQGI HHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHEEEEEECCCCEEEEECCCCCHHCCC RLNDKVVPPQGGVLGGTVFATVKGTGNKRTVTLVDRQGQPYPSQAGDRVTLVGWRSLENI EECCEECCCCCCEECCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEE NINAGTSRVKIMGNTIDGSGDGGIVIASDYNVRRILDPKNPADFPQDILIEGNKIRNIHA EEECCCCEEEEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCHHEEEECCEEEEEEC EGIGVLFSKSEGIVIRNNQIEDCGQSLGGFFSSCIFLAADNVRLENNGCRNTSSGITLYK CCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCCCCCEEEEE VFVSKSPQKSQRL EEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA