Click here to switch to the map view.

The map label for this gene is erg3 [H]

Identifier: 37523279

GI number: 37523279

Start: 3921097

End: 3922155

Strand: Reverse

Name: erg3 [H]

Synonym: gll3710

Alternate gene names: 37523279

Gene position: 3922155-3921097 (Counterclockwise)

Preceding gene: 37523280

Following gene: 37523278

Centisome position: 84.18

GC content: 62.98

Gene sequence:

>1059_bases
ATGAACCCGCTCGCGCGCGTCCTGCCTTTTCTGCCGCCCGAATTTGCCGAAGCGATCCACTGGCTGGGCTGGGCTACCGA
TCATTTTTTCCCCCTCAAGATGGCGGCGCTGCTGGCCCTGCCGCTGGCGATCGCCAGCGCGATCCTGGTGCTGCAGGTGC
ACGTCGCCCGCACGCACAGCTGGCCAAAAATTTGGGCCGACCTGCGCCAGGCCCACCAACTGACGCCCTCGTTTCGGGTC
GAATTGGGGCTGATGGCTCTGGGGATGGTGGGCATCGTGGGCTGGGCCACCGCCCTGGGCGATCAGGGCCGCCGGGTCAC
CCAGGGCGCGGTCGCCCAGTTTCTGCATCAGTTCTACCCGGAGCAGTGGACCCTGGCCGCTTTGGGTCACCGCTCCTTTG
GGGGCACCTTGCTGGCGCTGGTGTTCTACATCGCGCTGTTCGATCTGATTTTGTATGCCTCCCACCGCATCAAGCACAGC
CGGCTGCTCTGGGACCTCCACAAGATCCACCACTCGCCGACGTCGTTCAATCTGGTCTTTGCCGTCTACAACCGGGATCG
ATCGATTATCCCCACCTACGCGCTGCTCGATTGGATTCCTTTTGCTCTGCTGTTGCCTTTGGGCACGCCGGTGGGGGAGG
CGACGATCTATTTCGCCATTTACAAAGTCCTCGACAAAGCGCGCAATATCTGGATCCACATGCCTTTTTACACCAGCTTC
GGCTGGCTCGATTACCTGTTCGTCTCGCCCGCTGTGCACCAGTGCCACCACGGAGCCGACACGATTTACCACGGCAAGAA
TTTCGGCTCGCTGCTGTCGGTGTGGGACGTGCTCTTTGGCACCTACGCCAAACCGCCGGCCGAGCCCCCGGCCCTCGGTA
TCGGCGAGGACGGCGAGCGGTTGCACCGCAACCTGTTCGCCTTTTTGTGGCTGCCAATCCACGATCTGGGCCGCACCTGG
ATGCGCACGGCCGGATCGCTATTGCCCGCACGGCGTCCTCCGCCGAAAATGGCCGCCCCGGTGCTGCCTGTCCCCTCGAA
GGAGCCTTCCCTCAAATGA

Upstream 100 bases:

>100_bases
ACCACCTGGTGCTGCGCTTCGGCTAGAGGGGCCTTCCCGGCAAGGTTGCCTGCTTATCCAGTCCCGATTACCGCCGTTCC
ACACTTTTTGAGCATTGCCC

Downstream 100 bases:

>100_bases
ACTTGCGCCAGAAAGCCGTCAAAGGTGTGGGTTGGTCTGCCATCCGCAACCTGGGCAGCCAGGGTATTTCGCTGGGTGTC
TACTTTGTGCTGGCCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol-C5-desaturase [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNPLARVLPFLPPEFAEAIHWLGWATDHFFPLKMAALLALPLAIASAILVLQVHVARTHSWPKIWADLRQAHQLTPSFRV
ELGLMALGMVGIVGWATALGDQGRRVTQGAVAQFLHQFYPEQWTLAALGHRSFGGTLLALVFYIALFDLILYASHRIKHS
RLLWDLHKIHHSPTSFNLVFAVYNRDRSIIPTYALLDWIPFALLLPLGTPVGEATIYFAIYKVLDKARNIWIHMPFYTSF
GWLDYLFVSPAVHQCHHGADTIYHGKNFGSLLSVWDVLFGTYAKPPAEPPALGIGEDGERLHRNLFAFLWLPIHDLGRTW
MRTAGSLLPARRPPPKMAAPVLPVPSKEPSLK

Sequences:

>Translated_352_residues
MNPLARVLPFLPPEFAEAIHWLGWATDHFFPLKMAALLALPLAIASAILVLQVHVARTHSWPKIWADLRQAHQLTPSFRV
ELGLMALGMVGIVGWATALGDQGRRVTQGAVAQFLHQFYPEQWTLAALGHRSFGGTLLALVFYIALFDLILYASHRIKHS
RLLWDLHKIHHSPTSFNLVFAVYNRDRSIIPTYALLDWIPFALLLPLGTPVGEATIYFAIYKVLDKARNIWIHMPFYTSF
GWLDYLFVSPAVHQCHHGADTIYHGKNFGSLLSVWDVLFGTYAKPPAEPPALGIGEDGERLHRNLFAFLWLPIHDLGRTW
MRTAGSLLPARRPPPKMAAPVLPVPSKEPSLK
>Mature_352_residues
MNPLARVLPFLPPEFAEAIHWLGWATDHFFPLKMAALLALPLAIASAILVLQVHVARTHSWPKIWADLRQAHQLTPSFRV
ELGLMALGMVGIVGWATALGDQGRRVTQGAVAQFLHQFYPEQWTLAALGHRSFGGTLLALVFYIALFDLILYASHRIKHS
RLLWDLHKIHHSPTSFNLVFAVYNRDRSIIPTYALLDWIPFALLLPLGTPVGEATIYFAIYKVLDKARNIWIHMPFYTSF
GWLDYLFVSPAVHQCHHGADTIYHGKNFGSLLSVWDVLFGTYAKPPAEPPALGIGEDGERLHRNLFAFLWLPIHDLGRTW
MRTAGSLLPARRPPPKMAAPVLPVPSKEPSLK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sterol desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006694 [H]

Pfam domain/function: PF04116 FA_hydroxylase [H]

EC number: NA

Molecular weight: Translated: 39598; Mature: 39598

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLARVLPFLPPEFAEAIHWLGWATDHFFPLKMAALLALPLAIASAILVLQVHVARTHS
CCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WPKIWADLRQAHQLTPSFRVELGLMALGMVGIVGWATALGDQGRRVTQGAVAQFLHQFYP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
EQWTLAALGHRSFGGTLLALVFYIALFDLILYASHRIKHSRLLWDLHKIHHSPTSFNLVF
CCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
AVYNRDRSIIPTYALLDWIPFALLLPLGTPVGEATIYFAIYKVLDKARNIWIHMPFYTSF
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHH
GWLDYLFVSPAVHQCHHGADTIYHGKNFGSLLSVWDVLFGTYAKPPAEPPALGIGEDGER
HHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LHRNLFAFLWLPIHDLGRTWMRTAGSLLPARRPPPKMAAPVLPVPSKEPSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPLARVLPFLPPEFAEAIHWLGWATDHFFPLKMAALLALPLAIASAILVLQVHVARTHS
CCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WPKIWADLRQAHQLTPSFRVELGLMALGMVGIVGWATALGDQGRRVTQGAVAQFLHQFYP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
EQWTLAALGHRSFGGTLLALVFYIALFDLILYASHRIKHSRLLWDLHKIHHSPTSFNLVF
CCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
AVYNRDRSIIPTYALLDWIPFALLLPLGTPVGEATIYFAIYKVLDKARNIWIHMPFYTSF
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHH
GWLDYLFVSPAVHQCHHGADTIYHGKNFGSLLSVWDVLFGTYAKPPAEPPALGIGEDGER
HHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LHRNLFAFLWLPIHDLGRTWMRTAGSLLPARRPPPKMAAPVLPVPSKEPSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]