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The map label for this gene is 37523231

Identifier: 37523231

GI number: 37523231

Start: 3867990

End: 3868400

Strand: Reverse

Name: 37523231

Synonym: gll3662

Alternate gene names: NA

Gene position: 3868400-3867990 (Counterclockwise)

Preceding gene: 37523232

Following gene: 37523230

Centisome position: 83.03

GC content: 58.64

Gene sequence:

>411_bases
ATGTTCGACGACTGGCGCATCCGATATCTTCTTGAATGTCTACCACAAATTGCTTGGACTGCGAGGGCAAACGGTGCTCT
CGATTGTTGTAACAAGCGAGCCCTGGACTACACGGGCATGAGCGGAGAACAGCTGCAGGGTTGGGGGTGGAAGGCGGTTG
TCCACCCGAAGGATCTGCCCAGTTGTCTACAGCGTGGGTACAAAGCCACGCGCACCGGCACATCGTACGCTATGGAATAT
CGATTGCGCGCCGGCGATGGGAATTACCGGTGGCACCTGATGCAGGTGCAGCCGATCCGCGACGCCGAGGGCCGAATCGC
TCAGTGGTTTGGTACCTGTACCGATATCGACGCCTACAAGTCCTGTATCCGGCCCGCGTCCGACGGCGAGAGCGGACAGC
ACGAAAGCTAA

Upstream 100 bases:

>100_bases
GTGCGGCTTAAATCGATTTTTCGTTGCAATATCCCATCCGAATATGTGGCCGCCAGGTGGCGTTGATGGCTATCAATGAC
GCTGGGAGGTAAGTTCATCA

Downstream 100 bases:

>100_bases
AACCGCTTTTCTGTGCATAGATGTTCTGGGGGTTGCCCTACAAGCAGGCAGAGTGCAGGAGAGGCGGAGCCGGGAAGGCC
CGGGCGATGCCGCGCCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFDDWRIRYLLECLPQIAWTARANGALDCCNKRALDYTGMSGEQLQGWGWKAVVHPKDLPSCLQRGYKATRTGTSYAMEY
RLRAGDGNYRWHLMQVQPIRDAEGRIAQWFGTCTDIDAYKSCIRPASDGESGQHES

Sequences:

>Translated_136_residues
MFDDWRIRYLLECLPQIAWTARANGALDCCNKRALDYTGMSGEQLQGWGWKAVVHPKDLPSCLQRGYKATRTGTSYAMEY
RLRAGDGNYRWHLMQVQPIRDAEGRIAQWFGTCTDIDAYKSCIRPASDGESGQHES
>Mature_136_residues
MFDDWRIRYLLECLPQIAWTARANGALDCCNKRALDYTGMSGEQLQGWGWKAVVHPKDLPSCLQRGYKATRTGTSYAMEY
RLRAGDGNYRWHLMQVQPIRDAEGRIAQWFGTCTDIDAYKSCIRPASDGESGQHES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 15512; Mature: 15512

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDDWRIRYLLECLPQIAWTARANGALDCCNKRALDYTGMSGEQLQGWGWKAVVHPKDLP
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
SCLQRGYKATRTGTSYAMEYRLRAGDGNYRWHLMQVQPIRDAEGRIAQWFGTCTDIDAYK
HHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHH
SCIRPASDGESGQHES
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFDDWRIRYLLECLPQIAWTARANGALDCCNKRALDYTGMSGEQLQGWGWKAVVHPKDLP
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
SCLQRGYKATRTGTSYAMEYRLRAGDGNYRWHLMQVQPIRDAEGRIAQWFGTCTDIDAYK
HHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHH
SCIRPASDGESGQHES
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]