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The map label for this gene is nolA [H]

Identifier: 37523226

GI number: 37523226

Start: 3856665

End: 3857402

Strand: Reverse

Name: nolA [H]

Synonym: gll3657

Alternate gene names: 37523226

Gene position: 3857402-3856665 (Counterclockwise)

Preceding gene: 37523228

Following gene: 37523225

Centisome position: 82.79

GC content: 58.81

Gene sequence:

>738_bases
ATGCAAGCCCCACCCTGGAAAGTCGGCGAACTGGCCCGACAGACGGGGCTTTCAGTGCGCACGCTGCACTACTACGACGA
AATCAGCCTCCTCTCGCCTTCGCATTACACAGAGGGCGGTCATCGTTTGTACTGTACTGGCGACATTGCCCGCCTGCAGC
AGATCAAATCCCTCAGGCAGCTGGGCTTTTCTCTAGATGAAATCCGCACGAGTTTGGAGCGTTCCGACTGCTCGCCGCTC
GAGGTTCTTCAGCGGCACATCGCCCATGTAAAGGAGCAGATCGAGTTGCAGCAAAGACTGTGCACTCGCCTCGAAGCGAT
TGCACAGCGACTGCGCACGACGGAATCCGTCGGCGTTGAAGACTTTATCAATACTATCGAGGCTATGAACATGCTGGAAA
AATATTACACGCCCGAACAACTCGAAGAGCTGCAACAGCGCAGACAGCAGCTCGGCGAAGAACGTATCCGTGCGGTCGAG
GCGGAGTGGCCGACGCTCATCGCCAGGGTCCGCGCCGAGATGGACCGAGGCACCGATCCCGCGGACCCGACGATGCAGCA
GCTGGCGCGGCGCTGGCAGGAATTGATCGAGGAGTTCACAGGCGGCAACCCCGCCATCAACAAAGCCCTGCGCACCATGT
ACTGGCAGGAACCGGAACTGAGAACCCAGGGTGGACTCGATCCCAAGATTTTTGAGTACGTCTCGCGGGCAATCGCGGCG
GCAAAGCCGAAGGAGTAA

Upstream 100 bases:

>100_bases
GGGTTGGTTGGAGTGACCTCTTGATCCTCACGTTGCGTCAGGACATAGGCTGAATTTGCAGCGTTCAATCCGCCTGCAGA
GATCCACTGGAGGATGCCCT

Downstream 100 bases:

>100_bases
GCAACAGGACCAATGCGCCATGCACTCGTTTTCGCGCTTTTTCCCTATCGACACCGGCGTGAGCCCGATGACCCTGAAAA
TAGTTTTTTCTAGGTACGGA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQAPPWKVGELARQTGLSVRTLHYYDEISLLSPSHYTEGGHRLYCTGDIARLQQIKSLRQLGFSLDEIRTSLERSDCSPL
EVLQRHIAHVKEQIELQQRLCTRLEAIAQRLRTTESVGVEDFINTIEAMNMLEKYYTPEQLEELQQRRQQLGEERIRAVE
AEWPTLIARVRAEMDRGTDPADPTMQQLARRWQELIEEFTGGNPAINKALRTMYWQEPELRTQGGLDPKIFEYVSRAIAA
AKPKE

Sequences:

>Translated_245_residues
MQAPPWKVGELARQTGLSVRTLHYYDEISLLSPSHYTEGGHRLYCTGDIARLQQIKSLRQLGFSLDEIRTSLERSDCSPL
EVLQRHIAHVKEQIELQQRLCTRLEAIAQRLRTTESVGVEDFINTIEAMNMLEKYYTPEQLEELQQRRQQLGEERIRAVE
AEWPTLIARVRAEMDRGTDPADPTMQQLARRWQELIEEFTGGNPAINKALRTMYWQEPELRTQGGLDPKIFEYVSRAIAA
AKPKE
>Mature_245_residues
MQAPPWKVGELARQTGLSVRTLHYYDEISLLSPSHYTEGGHRLYCTGDIARLQQIKSLRQLGFSLDEIRTSLERSDCSPL
EVLQRHIAHVKEQIELQQRLCTRLEAIAQRLRTTESVGVEDFINTIEAMNMLEKYYTPEQLEELQQRRQQLGEERIRAVE
AEWPTLIARVRAEMDRGTDPADPTMQQLARRWQELIEEFTGGNPAINKALRTMYWQEPELRTQGGLDPKIFEYVSRAIAA
AKPKE

Specific function: Involved in genotype-specific nodulation of soybeans [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 28362; Mature: 28362

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPPWKVGELARQTGLSVRTLHYYDEISLLSPSHYTEGGHRLYCTGDIARLQQIKSLRQ
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHH
LGFSLDEIRTSLERSDCSPLEVLQRHIAHVKEQIELQQRLCTRLEAIAQRLRTTESVGVE
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DFINTIEAMNMLEKYYTPEQLEELQQRRQQLGEERIRAVEAEWPTLIARVRAEMDRGTDP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADPTMQQLARRWQELIEEFTGGNPAINKALRTMYWQEPELRTQGGLDPKIFEYVSRAIAA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH
AKPKE
CCCCC
>Mature Secondary Structure
MQAPPWKVGELARQTGLSVRTLHYYDEISLLSPSHYTEGGHRLYCTGDIARLQQIKSLRQ
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHH
LGFSLDEIRTSLERSDCSPLEVLQRHIAHVKEQIELQQRLCTRLEAIAQRLRTTESVGVE
HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DFINTIEAMNMLEKYYTPEQLEELQQRRQQLGEERIRAVEAEWPTLIARVRAEMDRGTDP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADPTMQQLARRWQELIEEFTGGNPAINKALRTMYWQEPELRTQGGLDPKIFEYVSRAIAA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH
AKPKE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631662 [H]