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The map label for this gene is ycf59

Identifier: 37523194

GI number: 37523194

Start: 3822719

End: 3823759

Strand: Reverse

Name: ycf59

Synonym: gvip493

Alternate gene names: 37523194

Gene position: 3823759-3822719 (Counterclockwise)

Preceding gene: 37523196

Following gene: 37523193

Centisome position: 82.07

GC content: 57.83

Gene sequence:

>1041_bases
ATGGTAGACGCATTGCGCGAGGCGAACACCGCATCCCAGTCTGAGCGGCGGGAAACTTTGCTCACCCCCCGGTTTTACAC
TACCGACTTCGAAGCCTTGGCCAAACTGGATATCTCGGCGATGGAAGCCGACTTCGAGGCCCTGCTCGCCGAATTTCAGG
CCGACTACAACCGCGAGCACTTCCAGCGCGACGCGGGCTTTGTGGAGCAAGCCCACCAGATCGATCCGCAGTGGCGCGCG
TTGATGCTCGAATTTCTCGAGCGCTCCTGCACCTCCGAATTCTCGGGATTTTTGCTCTACAAAGAAATTTCCCGCCGTCT
CAAAGCTGCCAATCCGCTGCTCGCCGAGTGTTTCAAAGCGATGTCGCGCGACGAAGCGCGCCACGCCGGTTTCTTGAACA
AGGCGATGGGCGACTACGACCTGGGCCTCGATCTGTCGAACCTTGCCAAGCAGAAAAAGTACACTTTCTTCAAGCCCAAG
TTCATCTTCTACGCCACTTACCTGTCGGAGAAGATTGGCTACTGGCGCTATATCGCCATCTTCCGGCACCTCGAGCGACA
CCCTGAAAACCGTATCCACCCGTTATTCAATTACTTCAAGAACTGGTGCCAGGACGAGAATCGCCACGGCGACTTTTTCG
GGCTGATTCTCAAAAGCCAGCCGCAGCTGCTCAAAGGTCCGATCAACCGGCTGTGGGTCCGCTTTTTCTTGCTGTCGTTC
TGCCTGACCATGTACCTCAACGACCGCAAGCCCCACAACCTCTACAGCGCCCTCGGCCTCGACGCCTCGCATTACGCGAT
GGAGGTGTTGCGGCAGACCAACCTCGATAGCGGCAAGGTCTTTCCGCTGATTCTCGATCTGGATAATCCCCGCTTTCAGC
GCCATCTCGATCGCTGCGCGGACTTGAATTTGCAGCTTGAGGCGCTCTCGGGAAAAAGTCCTCTGGCCCGCCTACCGGTG
ATCGCAGCCCTTGCCGGCACCATTGCCCAACTGTTTTTGCTCAAACCCGTGGCGCCCCCGGCCCCCGAAATGGTGCGCTG
A

Upstream 100 bases:

>100_bases
GATGGCCGAGCGGGCTCCGCAACATTGCGACAGCCGCGCTCAAAATTGCCCGAGGCTGCTGCTAGACTGATTAGCACTGT
GCTAGCGATACGGGCAGATT

Downstream 100 bases:

>100_bases
CGGTGGCTAGAAGGGTCGGGGCCTTCGTGGGCGGGTTCTTGCTGGGCACAGCTGTGGGTAGTGTGCTCGGGTTGCTCCTG
GCACCGCGATCCGGCGAGGA

Product: magnesium-protoporphyrin IX monomethyl ester cyclase

Products: NA

Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MVDALREANTASQSERRETLLTPRFYTTDFEALAKLDISAMEADFEALLAEFQADYNREHFQRDAGFVEQAHQIDPQWRA
LMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKAMSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPK
FIFYATYLSEKIGYWRYIAIFRHLERHPENRIHPLFNYFKNWCQDENRHGDFFGLILKSQPQLLKGPINRLWVRFFLLSF
CLTMYLNDRKPHNLYSALGLDASHYAMEVLRQTNLDSGKVFPLILDLDNPRFQRHLDRCADLNLQLEALSGKSPLARLPV
IAALAGTIAQLFLLKPVAPPAPEMVR

Sequences:

>Translated_346_residues
MVDALREANTASQSERRETLLTPRFYTTDFEALAKLDISAMEADFEALLAEFQADYNREHFQRDAGFVEQAHQIDPQWRA
LMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKAMSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPK
FIFYATYLSEKIGYWRYIAIFRHLERHPENRIHPLFNYFKNWCQDENRHGDFFGLILKSQPQLLKGPINRLWVRFFLLSF
CLTMYLNDRKPHNLYSALGLDASHYAMEVLRQTNLDSGKVFPLILDLDNPRFQRHLDRCADLNLQLEALSGKSPLARLPV
IAALAGTIAQLFLLKPVAPPAPEMVR
>Mature_346_residues
MVDALREANTASQSERRETLLTPRFYTTDFEALAKLDISAMEADFEALLAEFQADYNREHFQRDAGFVEQAHQIDPQWRA
LMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKAMSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPK
FIFYATYLSEKIGYWRYIAIFRHLERHPENRIHPLFNYFKNWCQDENRHGDFFGLILKSQPQLLKGPINRLWVRFFLLSF
CLTMYLNDRKPHNLYSALGLDASHYAMEVLRQTNLDSGKVFPLILDLDNPRFQRHLDRCADLNLQLEALSGKSPLARLPV
IAALAGTIAQLFLLKPVAPPAPEMVR

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomet

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AcsF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACSF_GLOVI (Q7NFA1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_926571.1
- ProteinModelPortal:   Q7NFA1
- GeneID:   2602029
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3625
- HOGENOM:   HBG284843
- OMA:   HGDFFDA
- ProtClustDB:   PRK13654
- BioCyc:   GVIO251221:GLL3625-MONOMER
- BRENDA:   1.14.13.81
- GO:   GO:0015979
- HAMAP:   MF_01840
- InterPro:   IPR008434
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251
- Gene3D:   G3DSA:1.20.1260.10
- TIGRFAMs:   TIGR02029

Pfam domain/function: PF02915 Rubrerythrin; SSF47240 Ferritin/RR_like

EC number: =1.14.13.81

Molecular weight: Translated: 40172; Mature: 40172

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDALREANTASQSERRETLLTPRFYTTDFEALAKLDISAMEADFEALLAEFQADYNREH
CCCCHHHHCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
FQRDAGFVEQAHQIDPQWRALMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPKFIFYATYLSEKIGYWRYIAI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHH
FRHLERHPENRIHPLFNYFKNWCQDENRHGDFFGLILKSQPQLLKGPINRLWVRFFLLSF
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
CLTMYLNDRKPHNLYSALGLDASHYAMEVLRQTNLDSGKVFPLILDLDNPRFQRHLDRCA
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH
DLNLQLEALSGKSPLARLPVIAALAGTIAQLFLLKPVAPPAPEMVR
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVDALREANTASQSERRETLLTPRFYTTDFEALAKLDISAMEADFEALLAEFQADYNREH
CCCCHHHHCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
FQRDAGFVEQAHQIDPQWRALMLEFLERSCTSEFSGFLLYKEISRRLKAANPLLAECFKA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MSRDEARHAGFLNKAMGDYDLGLDLSNLAKQKKYTFFKPKFIFYATYLSEKIGYWRYIAI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHH
FRHLERHPENRIHPLFNYFKNWCQDENRHGDFFGLILKSQPQLLKGPINRLWVRFFLLSF
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
CLTMYLNDRKPHNLYSALGLDASHYAMEVLRQTNLDSGKVFPLILDLDNPRFQRHLDRCA
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH
DLNLQLEALSGKSPLARLPVIAALAGTIAQLFLLKPVAPPAPEMVR
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292