Click here to switch to the map view.

The map label for this gene is petF [H]

Identifier: 37523192

GI number: 37523192

Start: 3822032

End: 3822325

Strand: Direct

Name: petF [H]

Synonym: gvip492

Alternate gene names: 37523192

Gene position: 3822032-3822325 (Clockwise)

Preceding gene: 37523187

Following gene: 37523195

Centisome position: 82.04

GC content: 57.14

Gene sequence:

>294_bases
ATGGCAACTTACAAAGTAACCCTGGTCACCCCCAGTGGCAAAAAAGAGATCGACTGTCCCAGTGATGAGTACATCCTGGA
TGCAGCCGAGCGCCAGGGCCTGGACCTGCCCTTCTCCTGCCGCGCGGGCGCCTGCTCGACCTGTGCCGGCAAGATGGTGA
GCGGGACGATCGATCAGGGCGATCAGTCTTTTCTGGATGACGACCAGATTGCAGCGGGTTATGTACTGACTTGCGTCGCT
TACCCGACCTCCAACTGCTCGATCGAAACCCACAAAGAAGACGAACTCTACTAG

Upstream 100 bases:

>100_bases
GGTGAGAAAAAATACCTAGAAGCGCCCACTGATCCCGATCGGGCTTATGGTACCTTGAGGAGTTGTGGCTTCTTAGTCCT
CAATCGGGAGAACAACCGAC

Downstream 100 bases:

>100_bases
GTTCTACCGACCGGACACAGGGGAGAGCCGCATTCTCTTCCCTGTTTTAGTGTCTTTAAGGCTCGACAGCCGGTGCCGGT
GGAACCGTCTGACCGTTGTT

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I [H]

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQGDQSFLDDDQIAAGYVLTCVA
YPTSNCSIETHKEDELY

Sequences:

>Translated_97_residues
MATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQGDQSFLDDDQIAAGYVLTCVA
YPTSNCSIETHKEDELY
>Mature_96_residues
ATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQGDQSFLDDDQIAAGYVLTCVAY
PTSNCSIETHKEDELY

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=82, Percent_Identity=43.9024390243902, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10439; Mature: 10307

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQG
CCEEEEEEECCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC
DQSFLDDDQIAAGYVLTCVAYPTSNCSIETHKEDELY
CCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ATYKVTLVTPSGKKEIDCPSDEYILDAAERQGLDLPFSCRAGACSTCAGKMVSGTIDQG
CEEEEEEECCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCC
DQSFLDDDQIAAGYVLTCVAYPTSNCSIETHKEDELY
CCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10625442; 11053838 [H]