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The map label for this gene is dcd [H]

Identifier: 37523079

GI number: 37523079

Start: 3715079

End: 3715690

Strand: Reverse

Name: dcd [H]

Synonym: gll3510

Alternate gene names: 37523079

Gene position: 3715690-3715079 (Counterclockwise)

Preceding gene: 37523080

Following gene: 37523078

Centisome position: 79.75

GC content: 63.73

Gene sequence:

>612_bases
ATGCTCAACAGTGACAGCTGGATCAAACAACGCGCCGCCGAGGGCATGATCGCCCCGTTCGAGGCCGAATTGGTGCGCCG
GGTAGACGACGGCTCGGGTCACCACCACCGGGTGCTGAGCTACGGGCTGTCTTCCGCCGGTTACGACATTCGCCTCGCCG
ACGACGAATTCAAGGTCTTCCGGCGCGTACCCGGGGCGCGGCCCATCGATCCCAAGCGCTTCGACAACACCTGCCTGGAG
GACATGGCGCTGATGAGCGGTCCGGAGGGCGATTATTTTATTTTGCCGGCCAACTCTTTGGCCCTGGCCCACTCGGTCGA
GCACTTTCGGATGCCCGACAACGTGGTCGGGGTGACCACCTGCAAGAGCACGTACATCCGCTCGGGCGTCAATATCCCGA
TCACCATTCTGGAGCCGGGCTGGACGGGGGTGCTCACCCTGGAGATCGCCAATCCCACCCCCTGCGACGTGATGGTCTAC
CCGAACGAGGGGATCGCCCAGGTGCTGTTTTTTACCACCGACCAGGTGCCCGAGGTGACCTACGCGACGCGCAAGGACGG
CCCCGGCAAGTACCAATCGCAGGAACAGCGCATCGTGCTGCCGCGGGTCTGA

Upstream 100 bases:

>100_bases
CGAGATGCCCATCGCCCTGAGCGCCATGGCCGATCAGGTGACCGAACTGCGCAAAAGCGCCATCCAGCCCTAAGATCGCA
GCAGGACTTGCGGGGGGCGG

Downstream 100 bases:

>100_bases
TGGCGGGCGTACTGGTAAGCGGCACCGACACCGGGGCCGGCAAGACGATCTTATGCGCGGCCCTCGCTGCCTGGTGGCTC
GCCCATCGCCGCACGCCGGC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLNSDSWIKQRAAEGMIAPFEAELVRRVDDGSGHHHRVLSYGLSSAGYDIRLADDEFKVFRRVPGARPIDPKRFDNTCLE
DMALMSGPEGDYFILPANSLALAHSVEHFRMPDNVVGVTTCKSTYIRSGVNIPITILEPGWTGVLTLEIANPTPCDVMVY
PNEGIAQVLFFTTDQVPEVTYATRKDGPGKYQSQEQRIVLPRV

Sequences:

>Translated_203_residues
MLNSDSWIKQRAAEGMIAPFEAELVRRVDDGSGHHHRVLSYGLSSAGYDIRLADDEFKVFRRVPGARPIDPKRFDNTCLE
DMALMSGPEGDYFILPANSLALAHSVEHFRMPDNVVGVTTCKSTYIRSGVNIPITILEPGWTGVLTLEIANPTPCDVMVY
PNEGIAQVLFFTTDQVPEVTYATRKDGPGKYQSQEQRIVLPRV
>Mature_203_residues
MLNSDSWIKQRAAEGMIAPFEAELVRRVDDGSGHHHRVLSYGLSSAGYDIRLADDEFKVFRRVPGARPIDPKRFDNTCLE
DMALMSGPEGDYFILPANSLALAHSVEHFRMPDNVVGVTTCKSTYIRSGVNIPITILEPGWTGVLTLEIANPTPCDVMVY
PNEGIAQVLFFTTDQVPEVTYATRKDGPGKYQSQEQRIVLPRV

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 22582; Mature: 22582

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSDSWIKQRAAEGMIAPFEAELVRRVDDGSGHHHRVLSYGLSSAGYDIRLADDEFKVF
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHEECCCCCCCCEEEEECHHHHHH
RRVPGARPIDPKRFDNTCLEDMALMSGPEGDYFILPANSLALAHSVEHFRMPDNVVGVTT
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHCCCCCEEEEEE
CKSTYIRSGVNIPITILEPGWTGVLTLEIANPTPCDVMVYPNEGIAQVLFFTTDQVPEVT
CCHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCE
YATRKDGPGKYQSQEQRIVLPRV
EEECCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MLNSDSWIKQRAAEGMIAPFEAELVRRVDDGSGHHHRVLSYGLSSAGYDIRLADDEFKVF
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHEECCCCCCCCEEEEECHHHHHH
RRVPGARPIDPKRFDNTCLEDMALMSGPEGDYFILPANSLALAHSVEHFRMPDNVVGVTT
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHCCCCCEEEEEE
CKSTYIRSGVNIPITILEPGWTGVLTLEIANPTPCDVMVYPNEGIAQVLFFTTDQVPEVT
CCHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCE
YATRKDGPGKYQSQEQRIVLPRV
EEECCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA