| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is yqhT [H]
Identifier: 37523051
GI number: 37523051
Start: 3691305
End: 3693200
Strand: Direct
Name: yqhT [H]
Synonym: glr3482
Alternate gene names: 37523051
Gene position: 3691305-3693200 (Clockwise)
Preceding gene: 37523050
Following gene: 37523054
Centisome position: 79.23
GC content: 67.56
Gene sequence:
>1896_bases ATGCTCCCGCGAGGATCTCTTTCTGTGGCTCCGCTCGATACTGTCCGCTCCGACGGCGCCGCCCGAGTGCGTGAACGCCT CGCCTGCCTGCGCCGGTTGCTGGCGGACCGGCAACTGGACGGCTATCTGGTCAACTCTACCGACGAGCATTTGAGTGAAT ACCTGCCCGAGGCCCGCGCCCGGCGCGCCTGGCTGAGCGGATTTACCGGTTCGGCGGGGGAGGTGCTGGTGGGGCTTGAG CAGAGCTGGCTTTTTGTCGATTCGCGCTACTGGGAGCAGGCGGACCAACAGGTCGATGGGCAGGCCATGGGCGTGTGCAA ACTGGGACTGGCAGGTCACAAGGGGCCCATCCAGACGCTCAAAGATCTAGGCCAGCTCCGCCGCGCCTCAGGGACGCCCT TTCGCCTGGGCCTTGACCCGCTGGCGATTGCCGTCGAGCAGTGGCGCACTTTCGAGCGCCAGTTGCGGCCGGTGGGGGTC GAAGTGGTGGCGGTGGCGGGCAACCTGGTCGATCGGGTGCGCGCCGAACTGGAGGGCGGATTGCCCTCGCTCTGGTCCGA GCGGCCCGTTTTTGCGGTGAGCGAAGCGGTGGCGGGCCAGTCCGCCGTCCAAAAGCTCGCGGCGGTGCGCGCGGAGATCG AGCGCGCCGGGGCGACGGTGCTGCCTGTCACCCGGCTCGATCAGGTGGCCTGGCTGTTGAACTTGCGCGGCTGGGATGTA CCCTTCAACCCCGTGTTCATCGCCTACGCCGTCGTCACCCGCACCGAGAGCTATCTGTTTACCGCCCCCGAGCGGCTGGA CGGCGGGGTGCGCGCCGCCCTGCCCGCGGAAGTGAACATCTTGCCCTACGAGGCTTACGGCGAGACCCTGGCCCGCCTGA CCGCCGACGGCACCGCCGCGGTGCTGGTCGACATTCGCCAGACGACCATGGGCACCCTCGGTGGGCTGGGCGGGGCGGCG GTGGTCGAGGCGGACCATCCGATCGAAAAACTCAAAGCCCACAAAAACACGGCCGAGATCGCAAGCATGCAGCGGGCCAA CCTGCAGGCGAGCCGGGCCAAGACCCGGGCCTTGGGCGAGGTGATGCGCCGCTTCGCAGCGGGCGAGACGGTGAGCGAAC AAGACGCAGCCGAGGCAGTCGAGCGGTATTACCGAGAGGAACCGGACTTCCAGGGCCTGAGCTTCACCCCGATTGCAGGC ATCGGCGCCCACAGCTCGATCGTCCACTACAGCACCCCGGACCCTGGCTCTGCGATGACCCCGGGCGCGCTGCTGTTGCT CGATTCGGGCGCCCAGTACACCGGCGGCACCACCGACGACACGCGCACCGTCGTCGCAGGCACCCCCGATCCTGAGCAGG TGCGCTGCTACACCGAGGTGCTCAAAGCCCAGATCAACTGCGCCGCGCAGCGCTTTCCGAAGGGGACCACCGGTGCCCAA CTCGACGGCATCACCCGCGCCAGTCTCTGGTGCGCGGGTCTGGAGTACGGGCACGGCACCGGCCACGGCGTGGGAGCGTT CTTGAGCGTCCACGAAGGCCCGGTCGGCCTCAACAAGTGCGCCCGCGAGGAGTTGCAGCCCGGGATGGTGACCAGCATCG AACCGGGCTACTACCGGCCGGGCTGGGGCGGTATCCGCATCGAGAACCTGTACGTCGTGCGCGAAGTGGAGAATGCCGAC GGCATCGTCTGGTACGGCTTTGAGCCGCTGACGTTCATCCCCTTCGACGCGCGGCTTGTCGATCTAGGTCGCCTCGACGA TCGCCAGCGCGCGTGGCTCGCCCACTACAACCGCACAGTTTACGAACGCCTCTCCCCGGATCTGGATCTTGAGGAGGTGC GATGGTTGGCGCAGCAGTGCCGCTTTGGGCTCGAAAGCTCAGCGGTTGCCCAGTAG
Upstream 100 bases:
>100_bases AAAGAGATCATGTGACCGGGGGTATCGCTGAACATTGGCGGTCTGTCGGTGACTATCGTTTCAGTATTGCACAGCACCGG CTTGCGTTAGTTTGGGGAAA
Downstream 100 bases:
>100_bases ACGCACCGCCGCAGCGGCCGGTACAGGGCTTTGGGCCGAAAAGCGCACCTGCTCGTTTTGCAGCACCGCCATCTGCTGCT GCATCGCCTTCAGCTCGCTG
Product: aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MLPRGSLSVAPLDTVRSDGAARVRERLACLRRLLADRQLDGYLVNSTDEHLSEYLPEARARRAWLSGFTGSAGEVLVGLE QSWLFVDSRYWEQADQQVDGQAMGVCKLGLAGHKGPIQTLKDLGQLRRASGTPFRLGLDPLAIAVEQWRTFERQLRPVGV EVVAVAGNLVDRVRAELEGGLPSLWSERPVFAVSEAVAGQSAVQKLAAVRAEIERAGATVLPVTRLDQVAWLLNLRGWDV PFNPVFIAYAVVTRTESYLFTAPERLDGGVRAALPAEVNILPYEAYGETLARLTADGTAAVLVDIRQTTMGTLGGLGGAA VVEADHPIEKLKAHKNTAEIASMQRANLQASRAKTRALGEVMRRFAAGETVSEQDAAEAVERYYREEPDFQGLSFTPIAG IGAHSSIVHYSTPDPGSAMTPGALLLLDSGAQYTGGTTDDTRTVVAGTPDPEQVRCYTEVLKAQINCAAQRFPKGTTGAQ LDGITRASLWCAGLEYGHGTGHGVGAFLSVHEGPVGLNKCAREELQPGMVTSIEPGYYRPGWGGIRIENLYVVREVENAD GIVWYGFEPLTFIPFDARLVDLGRLDDRQRAWLAHYNRTVYERLSPDLDLEEVRWLAQQCRFGLESSAVAQ
Sequences:
>Translated_631_residues MLPRGSLSVAPLDTVRSDGAARVRERLACLRRLLADRQLDGYLVNSTDEHLSEYLPEARARRAWLSGFTGSAGEVLVGLE QSWLFVDSRYWEQADQQVDGQAMGVCKLGLAGHKGPIQTLKDLGQLRRASGTPFRLGLDPLAIAVEQWRTFERQLRPVGV EVVAVAGNLVDRVRAELEGGLPSLWSERPVFAVSEAVAGQSAVQKLAAVRAEIERAGATVLPVTRLDQVAWLLNLRGWDV PFNPVFIAYAVVTRTESYLFTAPERLDGGVRAALPAEVNILPYEAYGETLARLTADGTAAVLVDIRQTTMGTLGGLGGAA VVEADHPIEKLKAHKNTAEIASMQRANLQASRAKTRALGEVMRRFAAGETVSEQDAAEAVERYYREEPDFQGLSFTPIAG IGAHSSIVHYSTPDPGSAMTPGALLLLDSGAQYTGGTTDDTRTVVAGTPDPEQVRCYTEVLKAQINCAAQRFPKGTTGAQ LDGITRASLWCAGLEYGHGTGHGVGAFLSVHEGPVGLNKCAREELQPGMVTSIEPGYYRPGWGGIRIENLYVVREVENAD GIVWYGFEPLTFIPFDARLVDLGRLDDRQRAWLAHYNRTVYERLSPDLDLEEVRWLAQQCRFGLESSAVAQ >Mature_631_residues MLPRGSLSVAPLDTVRSDGAARVRERLACLRRLLADRQLDGYLVNSTDEHLSEYLPEARARRAWLSGFTGSAGEVLVGLE QSWLFVDSRYWEQADQQVDGQAMGVCKLGLAGHKGPIQTLKDLGQLRRASGTPFRLGLDPLAIAVEQWRTFERQLRPVGV EVVAVAGNLVDRVRAELEGGLPSLWSERPVFAVSEAVAGQSAVQKLAAVRAEIERAGATVLPVTRLDQVAWLLNLRGWDV PFNPVFIAYAVVTRTESYLFTAPERLDGGVRAALPAEVNILPYEAYGETLARLTADGTAAVLVDIRQTTMGTLGGLGGAA VVEADHPIEKLKAHKNTAEIASMQRANLQASRAKTRALGEVMRRFAAGETVSEQDAAEAVERYYREEPDFQGLSFTPIAG IGAHSSIVHYSTPDPGSAMTPGALLLLDSGAQYTGGTTDDTRTVVAGTPDPEQVRCYTEVLKAQINCAAQRFPKGTTGAQ LDGITRASLWCAGLEYGHGTGHGVGAFLSVHEGPVGLNKCAREELQPGMVTSIEPGYYRPGWGGIRIENLYVVREVENAD GIVWYGFEPLTFIPFDARLVDLGRLDDRQRAWLAHYNRTVYERLSPDLDLEEVRWLAQQCRFGLESSAVAQ
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI93141226, Length=607, Percent_Identity=33.1136738056013, Blast_Score=330, Evalue=3e-90, Organism=Homo sapiens, GI264681563, Length=615, Percent_Identity=33.9837398373984, Blast_Score=325, Evalue=9e-89, Organism=Homo sapiens, GI264681565, Length=614, Percent_Identity=32.7361563517915, Blast_Score=299, Evalue=4e-81, Organism=Escherichia coli, GI1788728, Length=201, Percent_Identity=32.8358208955224, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17509539, Length=628, Percent_Identity=32.8025477707006, Blast_Score=289, Evalue=3e-78, Organism=Caenorhabditis elegans, GI25149105, Length=628, Percent_Identity=28.6624203821656, Blast_Score=239, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6322999, Length=651, Percent_Identity=29.6466973886329, Blast_Score=274, Evalue=4e-74, Organism=Drosophila melanogaster, GI17137632, Length=622, Percent_Identity=31.6720257234727, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI161078230, Length=638, Percent_Identity=26.0188087774295, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI21357287, Length=638, Percent_Identity=26.0188087774295, Blast_Score=228, Evalue=7e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 68663; Mature: 68663
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRGSLSVAPLDTVRSDGAARVRERLACLRRLLADRQLDGYLVNSTDEHLSEYLPEARA CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH RRAWLSGFTGSAGEVLVGLEQSWLFVDSRYWEQADQQVDGQAMGVCKLGLAGHKGPIQTL HHHHHCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH KDLGQLRRASGTPFRLGLDPLAIAVEQWRTFERQLRPVGVEVVAVAGNLVDRVRAELEGG HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCC LPSLWSERPVFAVSEAVAGQSAVQKLAAVRAEIERAGATVLPVTRLDQVAWLLNLRGWDV CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCC PFNPVFIAYAVVTRTESYLFTAPERLDGGVRAALPAEVNILPYEAYGETLARLTADGTAA CCCHHHHHHHHHHCCCCEEEECHHHHCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCCEE VLVDIRQTTMGTLGGLGGAAVVEADHPIEKLKAHKNTAEIASMQRANLQASRAKTRALGE EEEEEHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VMRRFAAGETVSEQDAAEAVERYYREEPDFQGLSFTPIAGIGAHSSIVHYSTPDPGSAMT HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC PGALLLLDSGAQYTGGTTDDTRTVVAGTPDPEQVRCYTEVLKAQINCAAQRFPKGTTGAQ CCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDGITRASLWCAGLEYGHGTGHGVGAFLSVHEGPVGLNKCAREELQPGMVTSIEPGYYRP CCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC GWGGIRIENLYVVREVENADGIVWYGFEPLTFIPFDARLVDLGRLDDRQRAWLAHYNRTV CCCCEEEEEEEEEEEECCCCCEEEECCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHH YERLSPDLDLEEVRWLAQQCRFGLESSAVAQ HHHCCCCCCHHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure MLPRGSLSVAPLDTVRSDGAARVRERLACLRRLLADRQLDGYLVNSTDEHLSEYLPEARA CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH RRAWLSGFTGSAGEVLVGLEQSWLFVDSRYWEQADQQVDGQAMGVCKLGLAGHKGPIQTL HHHHHCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH KDLGQLRRASGTPFRLGLDPLAIAVEQWRTFERQLRPVGVEVVAVAGNLVDRVRAELEGG HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCC LPSLWSERPVFAVSEAVAGQSAVQKLAAVRAEIERAGATVLPVTRLDQVAWLLNLRGWDV CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCC PFNPVFIAYAVVTRTESYLFTAPERLDGGVRAALPAEVNILPYEAYGETLARLTADGTAA CCCHHHHHHHHHHCCCCEEEECHHHHCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCCEE VLVDIRQTTMGTLGGLGGAAVVEADHPIEKLKAHKNTAEIASMQRANLQASRAKTRALGE EEEEEHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VMRRFAAGETVSEQDAAEAVERYYREEPDFQGLSFTPIAGIGAHSSIVHYSTPDPGSAMT HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC PGALLLLDSGAQYTGGTTDDTRTVVAGTPDPEQVRCYTEVLKAQINCAAQRFPKGTTGAQ CCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDGITRASLWCAGLEYGHGTGHGVGAFLSVHEGPVGLNKCAREELQPGMVTSIEPGYYRP CCCCHHHHHHEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC GWGGIRIENLYVVREVENADGIVWYGFEPLTFIPFDARLVDLGRLDDRQRAWLAHYNRTV CCCCEEEEEEEEEEEECCCCCEEEECCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHH YERLSPDLDLEEVRWLAQQCRFGLESSAVAQ HHHCCCCCCHHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]