| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37523012
Identifier: 37523012
GI number: 37523012
Start: 3651076
End: 3651864
Strand: Direct
Name: 37523012
Synonym: glr3443
Alternate gene names: NA
Gene position: 3651076-3651864 (Clockwise)
Preceding gene: 37523011
Following gene: 37523013
Centisome position: 78.37
GC content: 60.08
Gene sequence:
>789_bases ATGCATGATCTATTCGTCAAAGCCCGCACGCTGCTTGCGGTGCAGTACGCCTACATGCTCGAATACCGGGCGGAGCTGTT GCTGTGGGCGCTCTCGGGGTCGCTGCCGATTATCTTGATGGGGGTGTGGATCCAGGCGGCCCAGGGGGGACGCTTCGGTC TCGGTCCCCTCGACTTTGCCCGCTACTTTTTGGCCGTATTCGTCGTCCGCCAACTCACGGTCGTCTGGGTGATCTGGGAG TTCGAGCGCGAGGTAGTGGAGGGCAAACTCTCGCCGCTGTTGCTGCAGCCCATCGACCCGGTATGGCGTCATGTGGCGGG TCACATCAGCGAAAGATTCGCCCGGATGCCCTTCATCGTGATCTTGGTCGGTTTATTTTTCTTGCTCTATCCCCAGGCGT TCTGGCTACCCCGCTGGACCGACGCGCTGTTGTTCGTCGGTTTGGTTGTTCTGGTCTTTGCGCTGCGCTTTTTGATTCAA TACACCCTGGCGCTGCTCGCTTTTTGGACCGAACGCGCCTCAGCGATCGAGGAATTGTGGTTTTTGTGCTACTTGTTTCT TTCGGGGCTCATCGCGCCTCTGGAGGTTTTTCCGCCGCTGGTGCGGGAGGTGGCGCTGTGGACGCCTTTTCCGTATCTGG TGCACTTCCCCGCCGGCATTCTGGTCGGCCTGCCGGTGGATTTGCCGCGCGGCTTGTTGGTGATGGCCGTTTGGGGAGGG CTATTTTTTGTCCTGAACCGCTGGCTGTGGCGGCGTGGGCTCAAGCAGTACTCGGGGATGGGCGCCTGA
Upstream 100 bases:
>100_bases CCGCCCATCGAAGAGGTGATCGGCAAGGTGTTTTTGACAGGCTCCGTGGCCTAGGTGCCATGCAAACAGAGATCGAACCC GATGCGCTCAGGGGACCGGC
Downstream 100 bases:
>100_bases AGCAAGTCTGCTTATTGCAAGAATCCGCAGCGATTGAGAATTGTCTTGACCTGTCCCAAACAGTAAGCCACTGATACTGT GAGTTTCCGGCCTGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; Abc Transporter Integral Membrane Protein; Multidrug ABC Transporter; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MHDLFVKARTLLAVQYAYMLEYRAELLLWALSGSLPIILMGVWIQAAQGGRFGLGPLDFARYFLAVFVVRQLTVVWVIWE FEREVVEGKLSPLLLQPIDPVWRHVAGHISERFARMPFIVILVGLFFLLYPQAFWLPRWTDALLFVGLVVLVFALRFLIQ YTLALLAFWTERASAIEELWFLCYLFLSGLIAPLEVFPPLVREVALWTPFPYLVHFPAGILVGLPVDLPRGLLVMAVWGG LFFVLNRWLWRRGLKQYSGMGA
Sequences:
>Translated_262_residues MHDLFVKARTLLAVQYAYMLEYRAELLLWALSGSLPIILMGVWIQAAQGGRFGLGPLDFARYFLAVFVVRQLTVVWVIWE FEREVVEGKLSPLLLQPIDPVWRHVAGHISERFARMPFIVILVGLFFLLYPQAFWLPRWTDALLFVGLVVLVFALRFLIQ YTLALLAFWTERASAIEELWFLCYLFLSGLIAPLEVFPPLVREVALWTPFPYLVHFPAGILVGLPVDLPRGLLVMAVWGG LFFVLNRWLWRRGLKQYSGMGA >Mature_262_residues MHDLFVKARTLLAVQYAYMLEYRAELLLWALSGSLPIILMGVWIQAAQGGRFGLGPLDFARYFLAVFVVRQLTVVWVIWE FEREVVEGKLSPLLLQPIDPVWRHVAGHISERFARMPFIVILVGLFFLLYPQAFWLPRWTDALLFVGLVVLVFALRFLIQ YTLALLAFWTERASAIEELWFLCYLFLSGLIAPLEVFPPLVREVALWTPFPYLVHFPAGILVGLPVDLPRGLLVMAVWGG LFFVLNRWLWRRGLKQYSGMGA
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30169; Mature: 30169
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDLFVKARTLLAVQYAYMLEYRAELLLWALSGSLPIILMGVWIQAAQGGRFGLGPLDFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RYFLAVFVVRQLTVVWVIWEFEREVVEGKLSPLLLQPIDPVWRHVAGHISERFARMPFIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHH ILVGLFFLLYPQAFWLPRWTDALLFVGLVVLVFALRFLIQYTLALLAFWTERASAIEELW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLCYLFLSGLIAPLEVFPPLVREVALWTPFPYLVHFPAGILVGLPVDLPRGLLVMAVWGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LFFVLNRWLWRRGLKQYSGMGA HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHDLFVKARTLLAVQYAYMLEYRAELLLWALSGSLPIILMGVWIQAAQGGRFGLGPLDFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RYFLAVFVVRQLTVVWVIWEFEREVVEGKLSPLLLQPIDPVWRHVAGHISERFARMPFIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHH ILVGLFFLLYPQAFWLPRWTDALLFVGLVVLVFALRFLIQYTLALLAFWTERASAIEELW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLCYLFLSGLIAPLEVFPPLVREVALWTPFPYLVHFPAGILVGLPVDLPRGLLVMAVWGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LFFVLNRWLWRRGLKQYSGMGA HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA