| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ysgA [C]
Identifier: 37522970
GI number: 37522970
Start: 3603166
End: 3604044
Strand: Direct
Name: ysgA [C]
Synonym: glr3401
Alternate gene names: 37522970
Gene position: 3603166-3604044 (Clockwise)
Preceding gene: 37522969
Following gene: 37522972
Centisome position: 77.34
GC content: 63.14
Gene sequence:
>879_bases ATGGATTCGGATTTGCTCAGTTTGCTGCCCCGGGTGGAGGCGATCGACCGCCGCACGTTCATCGTGACCACCCTGGCGGC AGGTTTTGCCCTGGCGGTCTTGCCGGTGGGAGCGGCGACCATCAACACCGACACCACCGGACTGACCGCCGGGGAAGTGA AAATCCCGGTCAAAGACGGCGAGATTCCCGCCTACCGGGCGATGCCCGCCACCGGCAACAACCTGCCGGTGGTCCTAGTC GTGCAGGAAATTTTTGGCGTCCACGAGCACATCAAAGATGTCTGCCGCCGCTTCGCCAAACTCGGCTACTTCGCCATCGC CCCGGAACTGTACGCCCGCCAGGGGGACGTCTCCAAGATCCAGGAAGTCCAGAAAGTCATCGAAGTGGTGAACAAAGTGC CCGACGCCCAGGTGCTCTCCGACCTCGACGCCGCCGTCGCCTATGCCGCCGGGACCGGGCGGGTGAACGCCGAGAAATTG GCGGTCACCGGTTTTTGCTGGGGCGGGCGAATCACCTGGCTGTACGCGGCCCACAACCCAAAAATCAAAGCGGGAGGAGC CTGGTACGGCCGTCTGGTGGGCCAATCTAGTCCCAATACTCCGACCTACCCGGTCGATGTCGCCCCCAAGATCAAAGGGG CGGTCCTAGGCCTTTACGGCGGCCAGGATCAGGGCATCCCCGTCTCCACCGTCGAGCAGATGCGCAAGGTACTCAAAGCA TCGGGCAATCCTTCGGAGATCATCATCTACGAACAGGCCCCCCACGGCTTCCACGCCGACTACCGCCCAAGCTACCGCCC GGAGGCGGCCCAGGACGCCTGGCAGAAACTGCTCGCCTGGTTCAAAAAGCATGGGGTTGCGCAGCAGGTGTCGGGGTAA
Upstream 100 bases:
>100_bases CCCTGGATGTCTGCGTGACCCGCCTGGTCAAAGCAGGCGAAGCCTGATGTCCTCCTCCGGACTCTGGTAGGATTCCGGAG TTGCTCTCGGAGACCCCGCC
Downstream 100 bases:
>100_bases AATCGCTGCTTGTCCAGGTTTCCGGCTATCCTTCTGGGCGCAGCGACTTACCCAGGACTGTGCCGCAGTCGACACACGTC GTGCAGGCCCTGGAAGAGTA
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDSDLLSLLPRVEAIDRRTFIVTTLAAGFALAVLPVGAATINTDTTGLTAGEVKIPVKDGEIPAYRAMPATGNNLPVVLV VQEIFGVHEHIKDVCRRFAKLGYFAIAPELYARQGDVSKIQEVQKVIEVVNKVPDAQVLSDLDAAVAYAAGTGRVNAEKL AVTGFCWGGRITWLYAAHNPKIKAGGAWYGRLVGQSSPNTPTYPVDVAPKIKGAVLGLYGGQDQGIPVSTVEQMRKVLKA SGNPSEIIIYEQAPHGFHADYRPSYRPEAAQDAWQKLLAWFKKHGVAQQVSG
Sequences:
>Translated_292_residues MDSDLLSLLPRVEAIDRRTFIVTTLAAGFALAVLPVGAATINTDTTGLTAGEVKIPVKDGEIPAYRAMPATGNNLPVVLV VQEIFGVHEHIKDVCRRFAKLGYFAIAPELYARQGDVSKIQEVQKVIEVVNKVPDAQVLSDLDAAVAYAAGTGRVNAEKL AVTGFCWGGRITWLYAAHNPKIKAGGAWYGRLVGQSSPNTPTYPVDVAPKIKGAVLGLYGGQDQGIPVSTVEQMRKVLKA SGNPSEIIIYEQAPHGFHADYRPSYRPEAAQDAWQKLLAWFKKHGVAQQVSG >Mature_292_residues MDSDLLSLLPRVEAIDRRTFIVTTLAAGFALAVLPVGAATINTDTTGLTAGEVKIPVKDGEIPAYRAMPATGNNLPVVLV VQEIFGVHEHIKDVCRRFAKLGYFAIAPELYARQGDVSKIQEVQKVIEVVNKVPDAQVLSDLDAAVAYAAGTGRVNAEKL AVTGFCWGGRITWLYAAHNPKIKAGGAWYGRLVGQSSPNTPTYPVDVAPKIKGAVLGLYGGQDQGIPVSTVEQMRKVLKA SGNPSEIIIYEQAPHGFHADYRPSYRPEAAQDAWQKLLAWFKKHGVAQQVSG
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI48994982, Length=267, Percent_Identity=50.936329588015, Blast_Score=288, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR006311 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 31429; Mature: 31429
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSDLLSLLPRVEAIDRRTFIVTTLAAGFALAVLPVGAATINTDTTGLTAGEVKIPVKDG CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECEEEEEEECC EIPAYRAMPATGNNLPVVLVVQEIFGVHEHIKDVCRRFAKLGYFAIAPELYARQGDVSKI CCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCCHHHH QEVQKVIEVVNKVPDAQVLSDLDAAVAYAAGTGRVNAEKLAVTGFCWGGRITWLYAAHNP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCEEEEEEEECCC KIKAGGAWYGRLVGQSSPNTPTYPVDVAPKIKGAVLGLYGGQDQGIPVSTVEQMRKVLKA EEEECCCEEEHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC SGNPSEIIIYEQAPHGFHADYRPSYRPEAAQDAWQKLLAWFKKHGVAQQVSG CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MDSDLLSLLPRVEAIDRRTFIVTTLAAGFALAVLPVGAATINTDTTGLTAGEVKIPVKDG CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECEEEEEEECC EIPAYRAMPATGNNLPVVLVVQEIFGVHEHIKDVCRRFAKLGYFAIAPELYARQGDVSKI CCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCCHHHH QEVQKVIEVVNKVPDAQVLSDLDAAVAYAAGTGRVNAEKLAVTGFCWGGRITWLYAAHNP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCEEEEEEEECCC KIKAGGAWYGRLVGQSSPNTPTYPVDVAPKIKGAVLGLYGGQDQGIPVSTVEQMRKVLKA EEEECCCEEEHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC SGNPSEIIIYEQAPHGFHADYRPSYRPEAAQDAWQKLLAWFKKHGVAQQVSG CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168622 [H]