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The map label for this gene is ydhD [C]

Identifier: 37522909

GI number: 37522909

Start: 3544558

End: 3544896

Strand: Direct

Name: ydhD [C]

Synonym: glr3340

Alternate gene names: 37522909

Gene position: 3544558-3544896 (Clockwise)

Preceding gene: 37522907

Following gene: 37522911

Centisome position: 76.08

GC content: 53.98

Gene sequence:

>339_bases
ATGTCCCAGTCAACACACGAAAAAATCGATTCCCTTGTCAAAAATAACAAAGTGCTGATCTTTATGAAGGGTACCCCCCA
GTTTCCGCAGTGCGGTTTCTCCGCCGCCTCGGTGCAGATTCTCTCTTCGCTGGGTCACCCGTTTGAAGCGGTCAACGTGC
TCGACGATTTTGAGATCCGCCAGGGCATCAAAGACTACGCCAACTGGCCGACGATTCCCCAGGTGTACGTCGACGGCGAA
TTTGTCGGCGGCTGCGACATTTTGATCGAAATGCACAACCGCGGCGAATTGAAACCCCTGCTCGACCAGGCTTTTGAGGG
CGAAGGGGCCAAAGCCTAA

Upstream 100 bases:

>100_bases
ACACATAGTTGTCCTTCAGGGCGTTGAGGCGGTGGACCAGCATCGGACCTCCCGGATTGCTGCGTTAAGATCAAGTATTG
ATGGCCAGGAGCTTGAAACC

Downstream 100 bases:

>100_bases
ATTCTCCCGCCGATGGCCCCAGATATCAGGGAACAGGCCGACAGGCGAGCTAGCGGCGGTCGCGGGTGAACTCCTGCACC
ACTTCGCGGTACTTGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSQSTHEKIDSLVKNNKVLIFMKGTPQFPQCGFSAASVQILSSLGHPFEAVNVLDDFEIRQGIKDYANWPTIPQVYVDGE
FVGGCDILIEMHNRGELKPLLDQAFEGEGAKA

Sequences:

>Translated_112_residues
MSQSTHEKIDSLVKNNKVLIFMKGTPQFPQCGFSAASVQILSSLGHPFEAVNVLDDFEIRQGIKDYANWPTIPQVYVDGE
FVGGCDILIEMHNRGELKPLLDQAFEGEGAKA
>Mature_111_residues
SQSTHEKIDSLVKNNKVLIFMKGTPQFPQCGFSAASVQILSSLGHPFEAVNVLDDFEIRQGIKDYANWPTIPQVYVDGEF
VGGCDILIEMHNRGELKPLLDQAFEGEGAKA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=66.304347826087, Blast_Score=134, Evalue=1e-32,
Organism=Homo sapiens, GI95113651, Length=95, Percent_Identity=48.4210526315789, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787943, Length=100, Percent_Identity=51, Blast_Score=120, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=52.5252525252525, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988159, Length=88, Percent_Identity=43.1818181818182, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71988153, Length=88, Percent_Identity=43.1818181818182, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=107, Percent_Identity=46.7289719626168, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=43.3734939759036, Blast_Score=80, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=43.3734939759036, Blast_Score=80, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24642023, Length=96, Percent_Identity=56.25, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=42.4242424242424, Blast_Score=98, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12368; Mature: 12237

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSTHEKIDSLVKNNKVLIFMKGTPQFPQCGFSAASVQILSSLGHPFEAVNVLDDFEIR
CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
QGIKDYANWPTIPQVYVDGEFVGGCDILIEMHNRGELKPLLDQAFEGEGAKA
HHHHHHHCCCCCCEEEECCCEECCEEEEEEECCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQSTHEKIDSLVKNNKVLIFMKGTPQFPQCGFSAASVQILSSLGHPFEAVNVLDDFEIR
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
QGIKDYANWPTIPQVYVDGEFVGGCDILIEMHNRGELKPLLDQAFEGEGAKA
HHHHHHHCCCCCCEEEECCCEECCEEEEEEECCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]