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The map label for this gene is ycf84

Identifier: 37522902

GI number: 37522902

Start: 3539166

End: 3540320

Strand: Reverse

Name: ycf84

Synonym: gvip459

Alternate gene names: NA

Gene position: 3540320-3539166 (Counterclockwise)

Preceding gene: 37522903

Following gene: 37522901

Centisome position: 75.99

GC content: 62.77

Gene sequence:

>1155_bases
ATGATTGGCAAAGTAGGCGGGGATCCCACAGCAAGAGTCCTGAAGATTGTGGACCTCTATCTGGTCTCGGAGTTGCTGCT
GCCGTTTTTGTTCGGGGTGGCGACGTTTGCCTCCCTGGGCATGATTGTCGGCTCGCTCTTTGAGCTGGTGCGGGCGATGC
TCGACAACGGCCTGTCGGTGACGGTGGCAGCCCAGGTGTTCGCCCTGCGGCTTCCTTCTGTTATTGTCATTACTTTTCCT
ACAGCGATGCTGCTCGCCACGCTCCTGGCCTACGCCCGGCTGTCCGGCGACGCCGAGACGGTGGCGATGCGCGCCTGCGG
GATGAGCGTCTACCGGCTGGTGCTCCCGGCCCTGGCGGTCGGTTTGCTGGTCACCGGGGCCACCTTTATGTGCAACGAAC
TGGTGGTACCGGCGAGCAACGCCGAAGCGAGCCGGTTGCTCTTCCAGGCCATCGACCGCGACAAGCCCGATTTTCAGAAG
GACAATATCATCTACCCCGAGTACGGGTTTGTGACGCCGCGCGATGGTCGCCCCACCTACCACACCCTGGTGCGGCTGTT
CTATGCCCGTCAGTTCGCCGGGGGAATCATGCGCGAACTGACGGTGCTCGATTATTCGCAAGATGCCATCAACCAGGTGA
TCACCGCCGCCGCCGCGGTCTACGACAACCGCTCAGGATCCTGGACACTCCAGGACGGCACCGTCTATGTGGTCGCCCCG
GACGGCTCCTACCGCAATGTACTGCGCTTCAAGCGCCAGCAAGTCAAGCTCAGCGAGCGGCCCGAGCAGTTCGGGGGCGG
TGCGCGCCCGGAGGATCTGCCCATTGCCCAGCTGAGCGATTACATCCGCCGCCTGGAACTCTCGCAGCAGCAGGTGCGCA
CTCTGCAAGTCAGCCTCCAGCAGAAGTACGCCATACCGGTCACCTGCTTTGTCTTTGCTCTGGTAGGCGCGACTTTGGGC
CTCAGGCGGGTACGCACCAGCAACGCCCTCGGTTTGGGGCTGAGCATCTTGATTATTTTTGGCTACTACTTGCTGATGTT
CGTCGCCCAGGCCCTCGGTCAGACCGGAGTGATCGCTCCCTGGTTGGGAGCCTGGGCACCCAATCTCGCGACCGGTGCCC
TCGGGGTGCTGCTGCTGTGGCGCACCGCCCGCTGA

Upstream 100 bases:

>100_bases
GATCCCCGCCGGCGCCGAGCGGGGCTGAGGTGCCCACGAGCGCTTCGCAAATGTTTCAGGCTATGCTTTTATCTGGCCAT
TCGCTCCGGTCCCAGCGCGC

Downstream 100 bases:

>100_bases
GGGCGCGCTTGCGGCGGGTGCGCCGCCAAACGTAGTAGGATACAAGCTTTGAAAGTCCCGTGGAACCAGGGGGATAGACG
GTGGCCTCGGTCATTCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIGKVGGDPTARVLKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPSVIVITFP
TAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNELVVPASNAEASRLLFQAIDRDKPDFQK
DNIIYPEYGFVTPRDGRPTYHTLVRLFYARQFAGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAP
DGSYRNVLRFKRQQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQQKYAIPVTCFVFALVGATLG
LRRVRTSNALGLGLSILIIFGYYLLMFVAQALGQTGVIAPWLGAWAPNLATGALGVLLLWRTAR

Sequences:

>Translated_384_residues
MIGKVGGDPTARVLKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPSVIVITFP
TAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNELVVPASNAEASRLLFQAIDRDKPDFQK
DNIIYPEYGFVTPRDGRPTYHTLVRLFYARQFAGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAP
DGSYRNVLRFKRQQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQQKYAIPVTCFVFALVGATLG
LRRVRTSNALGLGLSILIIFGYYLLMFVAQALGQTGVIAPWLGAWAPNLATGALGVLLLWRTAR
>Mature_384_residues
MIGKVGGDPTARVLKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSVTVAAQVFALRLPSVIVITFP
TAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAVGLLVTGATFMCNELVVPASNAEASRLLFQAIDRDKPDFQK
DNIIYPEYGFVTPRDGRPTYHTLVRLFYARQFAGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAP
DGSYRNVLRFKRQQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQQKYAIPVTCFVFALVGATLG
LRRVRTSNALGLGLSILIIFGYYLLMFVAQALGQTGVIAPWLGAWAPNLATGALGVLLLWRTAR

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41922; Mature: 41922

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKVGGDPTARVLKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVAAQVFALRLPSVIVITFPTAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAV
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLLVTGATFMCNELVVPASNAEASRLLFQAIDRDKPDFQKDNIIYPEYGFVTPRDGRPTY
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHH
HTLVRLFYARQFAGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEC
DGSYRNVLRFKRQQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQ
CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKYAIPVTCFVFALVGATLGLRRVRTSNALGLGLSILIIFGYYLLMFVAQALGQTGVIAP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WLGAWAPNLATGALGVLLLWRTAR
HHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGKVGGDPTARVLKIVDLYLVSELLLPFLFGVATFASLGMIVGSLFELVRAMLDNGLSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
TVAAQVFALRLPSVIVITFPTAMLLATLLAYARLSGDAETVAMRACGMSVYRLVLPALAV
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLLVTGATFMCNELVVPASNAEASRLLFQAIDRDKPDFQKDNIIYPEYGFVTPRDGRPTY
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHH
HTLVRLFYARQFAGGIMRELTVLDYSQDAINQVITAAAAVYDNRSGSWTLQDGTVYVVAP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEC
DGSYRNVLRFKRQQVKLSERPEQFGGGARPEDLPIAQLSDYIRRLELSQQQVRTLQVSLQ
CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKYAIPVTCFVFALVGATLGLRRVRTSNALGLGLSILIIFGYYLLMFVAQALGQTGVIAP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WLGAWAPNLATGALGVLLLWRTAR
HHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA