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The map label for this gene is yohM [C]

Identifier: 37522896

GI number: 37522896

Start: 3529931

End: 3530725

Strand: Direct

Name: yohM [C]

Synonym: glr3327

Alternate gene names: 37522896

Gene position: 3529931-3530725 (Clockwise)

Preceding gene: 37522891

Following gene: 37522897

Centisome position: 75.77

GC content: 66.92

Gene sequence:

>795_bases
ATGGCCGTGTCTGGAATGCTGTACGTTGTATCCGCTTTTGGTCTGGGAGCCCTGCACGCGCTGGAGCCGGGCCACGGCAA
GAGCTTGATGGCGGCTTATCTGGTGGGCAGCCGCGGCCGGCCCTGGGACGCGGTGGTCCTGGGGCTGGTGGTCACCCTCA
CCCATACGCTGAGCGTCTATTTGCTGGCGGCGCTGACGCTGGTGGCGGCCCGCTATTTTGCGCCTGCGTGGGTGGAGCAC
TATCTGGAACTGATTTCGGGGCTATTGGTGCTGGCGGTGGGTGCCTGGCTGGTGTGGCAGCGGGCGATTGCCCGGCTCTG
GGCCGGTTGGAATCATCGCCTCAGCCACGCGCTCAACATGCGGCACGACCATGACCATGGCTACCATGGCCACTCCAATG
ATCATGAGCACGATCACGATCACGAGCATGGCCACTCCCACGATCATCCCCACGGGAGCGTGCGCACCGGCGAGCGGCTC
GATACCCGGGCGCTGATTGCCCTGGGCGTCTCCGGGGGGGTGGTGCCCTGTCCGGGGGCACTCGCGGTGTTGCTCACGGC
GGTGGCGGCGGGCGGGCTGTCCGACGTTCTGCAGGGACTGGGGTTGGTGGTGGTCTTCAGCCTCGGGCTGGCCTCGGTGC
TGATCGGTCTGGGCCTCAGCCTGGTGCTCTCGGTCCACTGGCTCGAAAAGCGCATCGACGGCAGTGAACGCTACGCACCC
CTGGTCGGCCAGGCCAGCGCCTGGTTCATCTTTGCCCTGGGGGCGTACCTGACGGTGCGCGCCGTCTGGTCCTGA

Upstream 100 bases:

>100_bases
ACTGTTCGTTCATGGACTGCCCGCAGCTTGAACGAGCCCGTCGCCGTTGCGCAGAGCACACCCCCGGTCTGCTAAGTTAC
ACAGCAGGCTTGCCCGGAGA

Downstream 100 bases:

>100_bases
GGCGTTTTCACCCCCGCGCACCCTTCAAAACGAACCCTTCATGCGAGGACCACCATGTCCGTACCCCGTCTGGTGCTCAT
TTCCTCAGCCACGGCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAVSGMLYVVSAFGLGALHALEPGHGKSLMAAYLVGSRGRPWDAVVLGLVVTLTHTLSVYLLAALTLVAARYFAPAWVEH
YLELISGLLVLAVGAWLVWQRAIARLWAGWNHRLSHALNMRHDHDHGYHGHSNDHEHDHDHEHGHSHDHPHGSVRTGERL
DTRALIALGVSGGVVPCPGALAVLLTAVAAGGLSDVLQGLGLVVVFSLGLASVLIGLGLSLVLSVHWLEKRIDGSERYAP
LVGQASAWFIFALGAYLTVRAVWS

Sequences:

>Translated_264_residues
MAVSGMLYVVSAFGLGALHALEPGHGKSLMAAYLVGSRGRPWDAVVLGLVVTLTHTLSVYLLAALTLVAARYFAPAWVEH
YLELISGLLVLAVGAWLVWQRAIARLWAGWNHRLSHALNMRHDHDHGYHGHSNDHEHDHDHEHGHSHDHPHGSVRTGERL
DTRALIALGVSGGVVPCPGALAVLLTAVAAGGLSDVLQGLGLVVVFSLGLASVLIGLGLSLVLSVHWLEKRIDGSERYAP
LVGQASAWFIFALGAYLTVRAVWS
>Mature_263_residues
AVSGMLYVVSAFGLGALHALEPGHGKSLMAAYLVGSRGRPWDAVVLGLVVTLTHTLSVYLLAALTLVAARYFAPAWVEHY
LELISGLLVLAVGAWLVWQRAIARLWAGWNHRLSHALNMRHDHDHGYHGHSNDHEHDHDHEHGHSHDHPHGSVRTGERLD
TRALIALGVSGGVVPCPGALAVLLTAVAAGGLSDVLQGLGLVVVFSLGLASVLIGLGLSLVLSVHWLEKRIDGSERYAPL
VGQASAWFIFALGAYLTVRAVWS

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=260, Percent_Identity=32.3076923076923, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 28273; Mature: 28142

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVSGMLYVVSAFGLGALHALEPGHGKSLMAAYLVGSRGRPWDAVVLGLVVTLTHTLSVY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLAALTLVAARYFAPAWVEHYLELISGLLVLAVGAWLVWQRAIARLWAGWNHRLSHALNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
RHDHDHGYHGHSNDHEHDHDHEHGHSHDHPHGSVRTGERLDTRALIALGVSGGVVPCPGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCHH
LAVLLTAVAAGGLSDVLQGLGLVVVFSLGLASVLIGLGLSLVLSVHWLEKRIDGSERYAP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
LVGQASAWFIFALGAYLTVRAVWS
HHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]